RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 USH1GQ495M9 461 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MAB21L3Q8N8X9 362 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 ELMO3Q96BJ8 720 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 INTS2Q9H0H0 1204 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MEIS2O14770 477 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CLGNO14967 610 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 OAS1P00973 400 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 RPA1P27694 616 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 COPS2P61201 443 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MGAT5Q09328 741 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 SPDYCQ5MJ68 293 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 C1orf54Q8WWF1 131 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 KAT5Q92993 513 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MXD3Q9BW11 206 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CDC42EP4Q9H3Q1 356 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 ANKRD62A6NC57 917 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CHMP2AO43633 222 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 UFL1O94874 794 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 PSMC2P35998 433 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 DLG4P78352 724 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 BNIP1Q12981 228 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 TNFAIP8L3Q5GJ75 292 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CCDC134Q9H6E4 229 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 ADAM22Q9P0K1 906 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 EME2A4GXA9 379 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 TISP43B9A030 160 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 TP73O15350 636 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 RARGP13631 454 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 ANXA13P27216 316 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 CHRNA3P32297 505 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 ANKLE1Q8NAG6 615 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 LENG9Q96B70 501 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 AGPAT1Q99943 283 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 ZSWIM1Q9BR11 485 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 KIF9Q9HAQ2 790 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 IGKV6D-41A0A0C4DH26 115 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 CTNNA2P26232 953 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 GCKP35557 465 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 MSH2P43246 934 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 VPS41P49754 854 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 PEX5P50542 639 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 SLC8A3P57103 927 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 GABPAQ06546 454 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 KYNUQ16719 465 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 PRUNE1Q86TP1 453 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 TPH2Q8IWU9 490 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 PCYOX1Q9UHG3 505 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 LAMB2P55268 1798 aa13.54□□□□□ -0.24
CLCNKA-204ENST00000464764 SLC16A3O15427 465 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ALADP13716 330 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 CHRNB2P17787 502 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM47EQ6ZV65 393 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ART4Q93070 314 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 SLC5A4Q9NY91 659 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 APEX2Q9UBZ4 518 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ENO4A6NNW6 628 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 GNPATO15228 680 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 MSH4O15457 936 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 SUN1O94901 812 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 MYBL1P10243 752 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 CETPP11597 493 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ARHGEF19Q8IW93 802 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 PCIF1Q9H4Z3 704 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 RABGAP1Q9Y3P9 1069 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 GTPBP10A4D1E9 387 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms