RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 GPIHBP1Q8IV16 184 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 EHBP1Q8NDI1 1231 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 FAM184BQ9ULE4 1060 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 MYH9P35579 1960 aaKnown RBP15.85■□□□□ 0.13
COL5A1-205ENST00000464187 K7ENM7 598 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 ZRANB2O95218 330 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 MAPTP10636 758 aaKnown RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 DMP1Q13316 513 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 SPA17Q15506 151 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 STXBP4Q6ZWJ1 553 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 LENG1Q96BZ8 264 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 RNPEPQ9H4A4 650 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 C17orf75Q9HAS0 396 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 TRPC6Q9Y210 931 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 PCDHB13Q9Y5F0 798 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 ZSWIM8A7E2V4 1837 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 HTTP42858 3142 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 ZMYM2Q9UBW7 1377 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 PDXKO00764 312 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 PPP1R37O75864 691 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 ATP1A1P05023 1023 aaKnown RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 HOXD8P13378 290 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 RFC5P40937 340 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 DGKDQ16760 1214 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 MFSD14CQ5VZR4 134 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 HGSNATQ68CP4 663 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 TMCO3Q6UWJ1 677 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 STRA6Q9BX79 667 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 PARD6BQ9BYG5 372 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 NLRC4Q9NPP4 1024 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 TYW1Q9NV66 732 aaKnown RBP15.84■□□□□ 0.13
COL5A1-205ENST00000464187 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 PPME1Q9Y570 386 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 DUSP10Q9Y6W6 482 aa15.84■□□□□ 0.13
COL5A1-205ENST00000464187 MGAMO43451 1857 aa15.83■□□□□ 0.13
COL5A1-205ENST00000464187 ZBTB42B2RXF5 422 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 GPR25O00155 361 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 ENC1O14682 589 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 HBP1O60381 514 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 NPTX2P47972 431 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 RTP1P59025 263 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 APBA1Q02410 837 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 KCNH2Q12809 1159 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-205ENST00000464187 ASTE1Q2TB18 679 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-205ENST00000464187 FRMD5Q7Z6J6 570 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 BSNDQ8WZ55 320 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 TMEM143Q96AN5 459 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 CRACR2AQ9BSW2 395 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 IFIH1Q9BYX4 1025 aaKnown RBP15.83■□□□□ 0.12
COL5A1-205ENST00000464187 POLR3FQ9H1D9 316 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-205ENST00000464187 GANQ9H2C0 597 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 DEF6Q9H4E7 631 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 PCDHA13Q9Y5I0 950 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 FHOD1Q9Y613 1164 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 UBE4BO95155 1302 aa15.83■□□□□ 0.12
COL5A1-205ENST00000464187 A6NJR5 290 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CCDC169A6NNP5 214 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 H3BRB1 525 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SLC16A4O15374 487 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 MAFO75444 373 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SEC31AO94979 1220 aaKnown RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 AKR1A1P14550 325 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SMTNP53814 917 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 KIF5AQ12840 1032 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 PAPD7Q5XG87 772 aaKnown RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 TRPV1Q8NER1 839 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SYN2Q92777 582 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 ST6GALNAC4Q9H4F1 302 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 ANKZF1Q9H8Y5 726 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SRRDQ9UH36 339 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 MACROD2A1Z1Q3 448 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CTAGE15A4D2H0 777 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 AKR1B10O60218 316 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 NR3C1P04150 777 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CTAGE8P0CG41 777 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 PNMA6AP0CW24 399 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CYBAP13498 195 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 HOXD10P28358 340 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 POLR2FP61218 127 aaKnown RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 ALCAMQ13740 583 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 BMS1Q14692 1282 aaKnown RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CC2D1AQ6P1N0 951 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CTAGE6Q86UF2 777 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 CTAGE4Q8IX94 777 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 KRT222Q8N1A0 295 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 MSANTD4Q8NCY6 345 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SLC17A8Q8NDX2 589 aa15.82■□□□□ 0.12
COL5A1-205ENST00000464187 SPIRE2Q8WWL2 714 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms