RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GUCY1B3Q02153 619 aa22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 SMC1AQ14683 1233 aaKnown RBP22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 TMC7Q7Z402 723 aa22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 TMEM169Q96HH4 297 aa22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 KANSL3Q9P2N6 904 aa22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 DBR1Q9UK59 544 aaKnown RBP22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 USP15Q9Y4E8 981 aaPredicted RBP22.86■■□□□ 1.25
PDLIM4-205ENST00000463615 C2orf71A6NGG8 1288 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 TSPAN1O60635 241 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 HOXB8P17481 243 aaPredicted RBP22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 CAPSQ13938 189 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 CBX2Q14781 532 aaPredicted RBP22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 DDX53Q86TM3 631 aaKnown RBP22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 CATSPER3Q86XQ3 398 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 ASAP3Q8TDY4 903 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 IGSF21Q96ID5 467 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 S1PR5Q9H228 398 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 RSAD1Q9HA92 442 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 UBN1Q9NPG3 1134 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 STK39Q9UEW8 545 aa22.85■■□□□ 1.25
PDLIM4-205ENST00000463615 PRR33A8MZF0 331 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 ZC3H11AO75152 810 aaKnown RBP eCLIP22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 ERLIN2O94905 339 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 OR52Z1P0C646 297 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 MUTP22033 750 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 GLRA2P23416 452 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 RPA1P27694 616 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 RBM10P98175 930 aaKnown RBP22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 MBTD1Q05BQ5 628 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 BMS1Q14692 1282 aaKnown RBP22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 AMHR2Q16671 573 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 ANKRD54Q6NXT1 300 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 TMEM173Q86WV6 379 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 NOSTRINQ8IVI9 506 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 PIGOQ8TEQ8 1089 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 NACC1Q96RE7 527 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 ZBP1Q9H171 429 aa22.84■■□□□ 1.25
PDLIM4-205ENST00000463615 LOC730098B7Z3J9 87 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 NT5C1B-RDH14C9J2C7 533 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 MED24O75448 989 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 ATP2B1P20020 1258 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 U2AF2P26368 475 aaKnown RBP eCLIP22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 GIT2Q14161 759 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 HERC4Q5GLZ8 1057 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 NOTUMQ6P988 496 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 SYCE2Q6PIF2 218 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 SMG8Q8ND04 991 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 MCPH1Q8NEM0 835 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 URGCPQ8TCY9 931 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 CCDC43Q96MW1 224 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 TMEM175Q9BSA9 504 aa22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 PHF7Q9BWX1 381 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-205ENST00000463615 B4GALT3O60512 393 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 CTSAP10619 480 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 RNASELQ05823 741 aaKnown RBP22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 NCBP1Q09161 790 aaKnown RBP22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 ZNF174Q15697 407 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 LONRF3Q496Y0 759 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 TTC38Q5R3I4 469 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 ZNF280BQ86YH2 543 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 VPS52Q8N1B4 723 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 C4orf32Q8N8J7 132 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 FAM184AQ8NB25 1140 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 ERMNQ8TAM6 284 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 CASP10Q92851 521 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 CSRNP2Q9H175 543 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 DNAJB4Q9UDY4 337 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 INPP5FQ9Y2H2 1132 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 IPPQ9Y573 584 aa22.82■■□□□ 1.24
PDLIM4-205ENST00000463615 ZMYM2Q9UBW7 1377 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 INO80B-WBP1J3KQ70 363 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 CLASP2O75122 1294 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 TECP42680 631 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 SLC11A1P49279 550 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 FXR2P51116 673 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 RABEP1Q15276 862 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 RNF135Q8IUD6 432 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 BCL7CQ8WUZ0 217 aaPredicted RBP22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 POLR3FQ9H1D9 316 aaPredicted RBP22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 HCFC2Q9Y5Z7 792 aa22.81■■□□□ 1.24
PDLIM4-205ENST00000463615 DDHD2O94830 711 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 CXCL14O95715 111 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 ITGA4P13612 1032 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 ARF4P18085 180 aaPredicted RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 AFF1P51825 1210 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 CDCA2Q69YH5 1023 aaPredicted RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 PPP4R3CPQ6ZMV5 832 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 PRIMPOLQ96LW4 560 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 EIF2AQ9BY44 585 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 DAXXQ9UER7 740 aaPredicted RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 RAPGEFL1Q9UHV5 662 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 NOL7Q9UMY1 257 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 C5orf42Q9H799 3197 aa22.8■■□□□ 1.24
PDLIM4-205ENST00000463615 A0A1B0GUA9 196 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 FAM86C2PA6NEL3 165 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 USO1O60763 962 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 ALDH2P05091 517 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 PDIA5Q14554 519 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 FAM187BQ17R55 369 aa22.79■■□□□ 1.24
PDLIM4-205ENST00000463615 VN1R3Q9BXE9 311 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms