RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 SESTD1Q86VW0 696 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 NEK11Q8NG66 645 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 BAP1Q92560 729 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 GPR20Q99678 358 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 C16orf70Q9BSU1 422 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 KATNAL1Q9BW62 490 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 GBP3Q9H0R5 595 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 ANKZF1Q9H8Y5 726 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 PRDM5Q9NQX1 630 aaPredicted RBP10.83□□□□□ -0.68
PTPRD-207ENST00000463477 CEP72Q9P209 647 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 TBX21Q9UL17 535 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 SCN10AQ9Y5Y9 1956 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 IGLV3-22A0A075B6J6 115 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 RBAK-RBAKDNI3L0D1 243 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 NOP56O00567 594 aaKnown RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 B4GALT4O60513 344 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ERLIN1O75477 346 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TIMP1P01033 207 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 SPATA31C1P0DKV0 1188 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ARP10275 920 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 PRLRP16471 622 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ITGB8P26012 769 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 PLA2G4AP47712 749 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 CKAP4Q07065 602 aaKnown RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 KIF5AQ12840 1032 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ARSHQ5FYA8 562 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 WDR93Q6P2C0 686 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 PDXDC1Q6P996 788 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 EPM2AIP1Q7L775 607 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 CATSPER3Q86XQ3 398 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TRIM58Q8NG06 486 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 SCFD1Q8WVM8 642 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 SEPT1Q8WYJ6 367 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 LBHD1Q9BQE6 289 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ARHGAP20Q9P2F6 1191 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 DNM3Q9UQ16 869 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 SAR1BQ9Y6B6 198 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 NFASCO94856 1347 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 A0A1W2PPC1 479 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 H3BRB1 525 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 MSH4O15457 936 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 SORBS3O60504 671 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 RAG1P15918 1043 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 MCM3P25205 808 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 PSEN2P49810 448 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ITIH3Q06033 890 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 KCNMA1Q12791 1236 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ASTE1Q2TB18 679 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 CCDC40Q4G0X9 1142 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 PRR16Q569H4 304 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 HERC4Q5GLZ8 1057 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 ZNF572Q7Z3I7 529 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 FUT8Q9BYC5 575 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TUT1Q9H6E5 874 aaKnown RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 AGO4Q9HCK5 861 aaKnown RBP10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TUFT1Q9NNX1 390 aa10.82□□□□□ -0.68
PTPRD-207ENST00000463477 TARSL2A2RTX5 802 aaKnown RBP10.81□□□□□ -0.68
PTPRD-207ENST00000463477 PDXKO00764 312 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 MAP2K7O14733 419 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 ZNF263O14978 683 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 CETN3O15182 167 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 EYA4O95677 639 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 LGALS2P05162 132 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 GAP43P17677 238 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 KIF11P52732 1056 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
PTPRD-207ENST00000463477 GIT2Q14161 759 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 MFSD10Q14728 455 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 TERF2Q15554 542 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 NFIL3Q16649 462 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 LONRF2Q1L5Z9 754 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 KIAA0753Q2KHM9 967 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 RNF10Q8N5U6 811 aaKnown RBP10.81□□□□□ -0.68
PTPRD-207ENST00000463477 RUBCNQ92622 972 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 BADQ92934 168 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 SECISBP2LQ93073 1101 aaKnown RBP10.81□□□□□ -0.68
PTPRD-207ENST00000463477 EEF2KMTQ96G04 330 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 LACRTQ9GZZ8 138 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 MMRN2Q9H8L6 949 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 SLC9A2Q9UBY0 812 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 PUF60Q9UHX1 559 aaKnown RBP10.81□□□□□ -0.68
PTPRD-207ENST00000463477 JRKLQ9Y4A0 524 aa10.81□□□□□ -0.68
PTPRD-207ENST00000463477 ATP8B3O60423 1300 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 GSTTP1A0A1W2PQM5 241 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 RCCD1A6NED2 376 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 LRRC53A6NM62 1247 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 IPO5O00410 1097 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 EPHB6O15197 1021 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms