RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 OFD1O75665 1012 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 XRCC6P12956 609 aaKnown RBP eCLIP24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 AXLP30530 894 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 PTENP60484 403 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 VN1R2Q8NFZ6 395 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 ERMNQ8TAM6 284 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 PIGOQ8TEQ8 1089 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 CCDC51Q96ER9 411 aa24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 NOL7Q9UMY1 257 aaKnown RBP24.65■■□□□ 1.54
PDLIM7-206ENST00000463411 USO1O60763 962 aaKnown RBP24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 OR52Z1P0C646 297 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 HOXA11P31270 313 aaPredicted RBP24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 TECP42680 631 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 RBM10P98175 930 aaKnown RBP24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 POU5F1BQ06416 359 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 CAPSQ13938 189 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 LLGL2Q6P1M3 1020 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 NOTUMQ6P988 496 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 TMEM184AQ6ZMB5 413 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 AGMOQ6ZNB7 445 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 MRPL10Q7Z7H8 261 aaKnown RBP24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 TMEM87AQ8NBN3 555 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 FBXO18Q8NFZ0 1043 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 FAM193BQ96PV7 902 aaPredicted RBP24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 NRDE2Q9H7Z3 1164 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 UBN1Q9NPG3 1134 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 C11orf16Q9NQ32 467 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 KANSL3Q9P2N6 904 aa24.64■■□□□ 1.54
PDLIM7-206ENST00000463411 TSPAN1O60635 241 aa24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 TTC38Q5R3I4 469 aa24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 UBXN11Q5T124 520 aa24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 IFNLR1Q8IU57 520 aaPredicted RBP24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 MRPL43Q8N983 215 aaKnown RBP24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 CASP10Q92851 521 aa24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 POLR3FQ9H1D9 316 aaPredicted RBP24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 RAPGEFL1Q9UHV5 662 aa24.63■■□□□ 1.53
PDLIM7-206ENST00000463411 C2orf71A6NGG8 1288 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 PRR33A8MZF0 331 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ST18O60284 1047 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ITGA4P13612 1032 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 NCLP19338 710 aaKnown RBP24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ARL2P36404 184 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 TRAPPC10P48553 1259 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 KCNC3Q14003 757 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ZNF174Q15697 407 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ANKRD54Q6NXT1 300 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 DDX53Q86TM3 631 aaKnown RBP24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 NOSTRINQ8IVI9 506 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 VPS52Q8N1B4 723 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 MCPH1Q8NEM0 835 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ASAP3Q8TDY4 903 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 IGSF21Q96ID5 467 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 NACC1Q96RE7 527 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 NFKBIZQ9BYH8 718 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 STK39Q9UEW8 545 aa24.62■■□□□ 1.53
PDLIM7-206ENST00000463411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 GALTP07902 379 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 SPATA31C1P0DKV0 1188 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 HOXB8P17481 243 aaPredicted RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 GLRA2P23416 452 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 MBTD1Q05BQ5 628 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 GIT2Q14161 759 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 HAUS3Q68CZ6 603 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 CATSPER3Q86XQ3 398 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 HACE1Q8IYU2 909 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 POLR3CQ9BUI4 534 aaPredicted RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 PHF7Q9BWX1 381 aaPredicted RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 TRIM6Q9C030 488 aaPredicted RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 ZBP1Q9H171 429 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 DNAJB4Q9UDY4 337 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 DBR1Q9UK59 544 aaKnown RBP24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 KIF3AQ9Y496 699 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 IPPQ9Y573 584 aa24.61■■□□□ 1.53
PDLIM7-206ENST00000463411 MED24O75448 989 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 CXCL14O95715 111 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 SLC11A1P49279 550 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 TPRNQ4KMQ1 711 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 TMEM173Q86WV6 379 aaPredicted RBP24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 RNF135Q8IUD6 432 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 CPB2Q96IY4 423 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 TMEM175Q9BSA9 504 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 CSRNP2Q9H175 543 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 HCFC2Q9Y5Z7 792 aa24.6■■□□□ 1.53
PDLIM7-206ENST00000463411 LRRIQ4A6NIV6 560 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 RPA1P27694 616 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 MCM2P49736 904 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 MAEAQ7L5Y9 396 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 ZNF280BQ86YH2 543 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 SUSD6Q92537 303 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 EIF2AQ9BY44 585 aaKnown RBP24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 MUTYHQ9UIF7 546 aa24.59■■□□□ 1.53
PDLIM7-206ENST00000463411 A0A087WWV3 80 aa24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 ARHGEF35A5YM69 484 aa24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 LOC730098B7Z3J9 87 aa24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 CLASP2O75122 1294 aaKnown RBP24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 POMCP01189 267 aa24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 CTSAP10619 480 aa24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 CBX2Q14781 532 aaPredicted RBP24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 HERC4Q5GLZ8 1057 aaPredicted RBP24.58■■□□□ 1.53
PDLIM7-206ENST00000463411 POTEGQ6S5H5 508 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms