RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 PRMT6Q96LA8 375 aaPredicted RBP13.68□□□□□ -0.22
NUP58-206ENST00000463407 BPIFA3Q9BQP9 254 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 TIPINQ9BVW5 301 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 GBA2Q9HCG7 927 aaPredicted RBP13.68□□□□□ -0.22
NUP58-206ENST00000463407 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
NUP58-206ENST00000463407 FAM8A1Q9UBU6 413 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 NUDT18Q6ZVK8 323 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 TNIP3Q96KP6 325 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 SIK2Q9H0K1 926 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 STX1BP61266 288 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
NUP58-206ENST00000463407 EMC2Q15006 297 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 EXT2Q93063 718 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 PALMO75781 387 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 TSNAXIP1Q2TAA8 658 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 SPON2Q9BUD6 331 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 HACD3Q9P035 362 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
NUP58-206ENST00000463407 TXNDC9O14530 226 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 CHGBP05060 677 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 CYP2C9P11712 490 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 PDIA6Q15084 440 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 MT-ND3P03897 115 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 DHX9Q08211 1270 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 HDLBPQ00341 1268 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 PRKCEQ02156 737 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 SHC4Q6S5L8 630 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 SLC7A5Q01650 507 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 DCAF4L1Q3SXM0 396 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 NUP85Q9BW27 656 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 SUDS3Q9H7L9 328 aaPredicted RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 INTS9Q9NV88 658 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 NSUN2Q08J23 767 aaKnown RBP eCLIP13.67□□□□□ -0.22
NUP58-206ENST00000463407 PDIA5Q14554 519 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 KLC3Q6P597 504 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 DDX50Q9BQ39 737 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
NUP58-206ENST00000463407 DIS3Q9Y2L1 958 aaKnown RBP13.67□□□□□ -0.22
NUP58-206ENST00000463407 USP32Q8NFA0 1604 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 C17orf102A2RUQ5 167 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 STXBP3O00186 592 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 LAMC2Q13753 1193 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TMEM132DQ14C87 1099 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 GLYCTKQ8IVS8 523 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
NUP58-206ENST00000463407 KCNA4P22459 653 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 RFC5P40937 340 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 FAM102AQ5T9C2 384 aaPredicted RBP13.66□□□□□ -0.22
NUP58-206ENST00000463407 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
NUP58-206ENST00000463407 PYROXD1Q8WU10 500 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 N4BP2L2Q92802 583 aaPredicted RBP13.66□□□□□ -0.22
NUP58-206ENST00000463407 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 JMJD4Q9H9V9 463 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
NUP58-206ENST00000463407 PRRG1O14668 218 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 FGGP02679 453 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 CYBBP04839 570 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 CAP2P40123 477 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 ACOT2P49753 483 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TFDP2Q14188 446 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 NAA25Q14CX7 972 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TBK1Q9UHD2 729 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 PIK3R2O00459 728 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 IFNAR2P48551 515 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 SLMAPQ14BN4 828 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 TJP2Q9UDY2 1190 aa13.66□□□□□ -0.22
NUP58-206ENST00000463407 PLS3P13797 630 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms