RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	CCDC113	Q9H0I3	377 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	FZD8	Q9H461	694 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	ST6GALNAC4	Q9H4F1	302 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	ZHX3	Q9H4I2	956 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	POLD4	Q9HCU8	107 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	OLFML3	Q9NRN5	406 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	AGPAT5	Q9NUQ2	364 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	PANK4	Q9NVE7	773 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	COLQ	Q9Y215	455 aa	Predicted RBP	11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	PIN4	Q9Y237	131 aa	Known RBP	11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	SLC4A7	Q9Y6M7	1214 aa		11.22	□□□□□ -0.61
SMIM7-204	ENST00000461488	CNTNAP2	Q9UHC6	1331 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	SFI1	A8K8P3	1242 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488		K7ENM7	598 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	ACKR2	O00590	384 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	SLC16A4	O15374	487 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	TSPAN1	O60635	241 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	GADD45B	O75293	160 aa	Predicted RBP	11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	PRPF40A	O75400	957 aa	Known RBP	11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	SKI	P12755	728 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	FGFR4	P22455	802 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	AFM	P43652	599 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	STRN3	Q13033	797 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	SNW1	Q13573	536 aa	Known RBP	11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	DSC3	Q14574	896 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	C9orf50	Q5SZB4	431 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	NOTUM	Q6P988	496 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	STXBP4	Q6ZWJ1	553 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	HAUS6	Q7Z4H7	955 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	SFR1	Q86XK3	245 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	TMEM161B	Q8NDZ6	487 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	PAGE5	Q96GU1	130 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	ADAM2	Q99965	735 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	TRAIP	Q9BWF2	469 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	TMX1	Q9H3N1	280 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	RGS18	Q9NS28	235 aa		11.21	□□□□□ -0.61
SMIM7-204	ENST00000461488	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	ENPP3	O14638	875 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	N4BP3	O15049	544 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	NR1I2	O75469	434 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	CSDE1	O75534	798 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	STAG3L1	P0CL83	205 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	LIG1	P18858	919 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	SARS	P49591	514 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	GTF2B	Q00403	316 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	COASY	Q13057	564 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	PRPF4B	Q13523	1007 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	CUL4B	Q13620	913 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	AMHR2	Q16671	573 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	TMEM132A	Q24JP5	1023 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	TCTN1	Q2MV58	587 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	TWF2	Q6IBS0	349 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	SLC24A5	Q71RS6	500 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	ADPGK	Q9BRR6	497 aa		11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	MRPL4	Q9BYD3	311 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	ELAC1	Q9H777	363 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	MRPL44	Q9H9J2	332 aa	Known RBP	11.2	□□□□□ -0.62
SMIM7-204	ENST00000461488	SZT2	Q5T011	3432 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	UBE4B	O95155	1302 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488		A0A1B0GUA9	196 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488		C9IYK1	514 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	MGEA5	O60502	916 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	EOMES	O95936	686 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	ATP2A2	P16615	1042 aa	Known RBP	11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	ARF4	P18085	180 aa	Predicted RBP	11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	PSMD2	Q13200	908 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	POSTN	Q15063	836 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	FAM26F	Q5R3K3	315 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	SLC27A1	Q6PCB7	646 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	ZPBP2	Q6X784	338 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	ZNF720	Q7Z2F6	126 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	NPAS4	Q8IUM7	802 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	GRAMD1C	Q8IYS0	662 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	HACE1	Q8IYU2	909 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	LINC01599	Q8WXQ3	324 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	RSPH1	Q8WYR4	309 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	FIZ1	Q96SL8	496 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	KIFC3	Q9BVG8	833 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	GTPBP4	Q9BZE4	634 aa	Known RBP	11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	BLZF1	Q9H2G9	400 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	LMBRD1	Q9NUN5	540 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	EXOC1	Q9NV70	894 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	LRFN2	Q9ULH4	789 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	PCDHB13	Q9Y5F0	798 aa		11.19	□□□□□ -0.62
SMIM7-204	ENST00000461488	ZMYM2	Q9UBW7	1377 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488		A0A0U1RQF3	1178 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	EIF3D	O15371	548 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	HOXA2	O43364	376 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	ZNF623	O75123	536 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	PPP1R37	O75864	691 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	SMC2	O95347	1197 aa		11.18	□□□□□ -0.62
SMIM7-204	ENST00000461488	GCNT3	O95395	438 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms