RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 INPP5FQ9Y2H2 1132 aa17.05■□□□□ 0.32
VARS-219ENST00000461328 PCDHB2Q9Y5E7 798 aa17.05■□□□□ 0.32
VARS-219ENST00000461328 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
VARS-219ENST00000461328 SPTBN5Q9NRC6 3674 aaKnown RBP17.04■□□□□ 0.32
VARS-219ENST00000461328 GRXCR2A6NFK2 248 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 LINC01565O15544 149 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 ZNF623O75123 536 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 IL9P15248 144 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 LTBRP36941 435 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 NRIP1P48552 1158 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 ERVFC1P60507 584 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 PLCB3Q01970 1234 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 KRT17Q04695 432 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 POU5F1BQ06416 359 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 PCBP1Q15365 356 aaKnown RBP eCLIP17.04■□□□□ 0.32
VARS-219ENST00000461328 CLUL1Q15846 466 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 NOMO2Q5JPE7 1267 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 ARL6IP4Q66PJ3 421 aaKnown RBP17.04■□□□□ 0.32
VARS-219ENST00000461328 PDE12Q6L8Q7 609 aaKnown RBP17.04■□□□□ 0.32
VARS-219ENST00000461328 ZBTB8OSQ8IWT0 167 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 TLE6Q9H808 572 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 LZTS1Q9Y250 596 aa17.04■□□□□ 0.32
VARS-219ENST00000461328 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 TSPAN1O60635 241 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 ZC3H11AO75152 810 aaKnown RBP eCLIP17.03■□□□□ 0.32
VARS-219ENST00000461328 CYP11B2P19099 503 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 AXLP30530 894 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 NDUFV1P49821 464 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 BCAR1P56945 870 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 DLX2Q07687 328 aaPredicted RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 TMEM132AQ24JP5 1023 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 NOTUMQ6P988 496 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
VARS-219ENST00000461328 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 URGCPQ8TCY9 931 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 TCF25Q9BQ70 676 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 ENTPD7Q9NQZ7 604 aa17.03■□□□□ 0.32
VARS-219ENST00000461328 E9PMD0 336 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 STX6O43752 255 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 TBX10O75333 385 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 OFD1O75665 1012 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 EYA4O95677 639 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 SSBP05455 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
VARS-219ENST00000461328 MBTD1Q05BQ5 628 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 RESTQ13127 1097 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 ADAM15Q13444 863 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 PPP2R5AQ15172 486 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 SLC39A11Q8N1S5 342 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 EFHBQ8N7U6 833 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 CNNM3Q8NE01 707 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 CCDC51Q96ER9 411 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 CPB2Q96IY4 423 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 IFT74Q96LB3 600 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 PLIN2Q99541 437 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.32
VARS-219ENST00000461328 NFKBIZQ9BYH8 718 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
VARS-219ENST00000461328 CNTNAP2Q9UHC6 1331 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 CARNS1A5YM72 827 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 NT5C1B-RDH14C9J2C7 533 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 FSCN2O14926 492 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 PER2O15055 1255 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 LIG1P18858 919 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 AGMOQ6ZNB7 445 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 TMC7Q7Z402 723 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
VARS-219ENST00000461328 CABP7Q86V35 215 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 FAM178BQ8IXR5 827 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 AK8Q96MA6 479 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
VARS-219ENST00000461328 TRIM6Q9C030 488 aaPredicted RBP17.01■□□□□ 0.31
VARS-219ENST00000461328 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 CD207Q9UJ71 328 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 MTMR6Q9Y217 621 aa17.01■□□□□ 0.31
VARS-219ENST00000461328 FSD2A1L4K1 749 aa17■□□□□ 0.31
VARS-219ENST00000461328 ITGA4P13612 1032 aa17■□□□□ 0.31
VARS-219ENST00000461328 NCLP19338 710 aaKnown RBP17■□□□□ 0.31
VARS-219ENST00000461328 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
VARS-219ENST00000461328 UBA7P41226 1012 aa17■□□□□ 0.31
VARS-219ENST00000461328 NAMPTP43490 491 aa17■□□□□ 0.31
VARS-219ENST00000461328 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
VARS-219ENST00000461328 AMHR2Q16671 573 aa17■□□□□ 0.31
VARS-219ENST00000461328 DUSP6Q16828 381 aa17■□□□□ 0.31
VARS-219ENST00000461328 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
VARS-219ENST00000461328 BSNDQ8WZ55 320 aa17■□□□□ 0.31
VARS-219ENST00000461328 CALML4Q96GE6 196 aa17■□□□□ 0.31
VARS-219ENST00000461328 EIF2AQ9BY44 585 aaKnown RBP17■□□□□ 0.31
VARS-219ENST00000461328 CSRNP2Q9H175 543 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms