RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 FAM187BQ17R55 369 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 NAALADL2Q58DX5 795 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 ZNF689Q96CS4 500 aaPredicted RBP20.29■□□□□ 0.84
DDR1-241ENST00000460944 CPB2Q96IY4 423 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 FZD8Q9H461 694 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 CUEDC2Q9H467 287 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 RC3H2Q9HBD1 1191 aaKnown RBP20.29■□□□□ 0.84
DDR1-241ENST00000460944 MTMR10Q9NXD2 777 aa20.29■□□□□ 0.84
DDR1-241ENST00000460944 RBM19Q9Y4C8 960 aaKnown RBP20.29■□□□□ 0.84
DDR1-241ENST00000460944 CNTNAP2Q9UHC6 1331 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 RALGAPA2Q2PPJ7 1873 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 A0A087X0B3 334 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 TBKBP1A7MCY6 615 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 K7ERI5 159 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 B4GALT5O43286 388 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 ARHGEF15O94989 841 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 FGFR1P11362 822 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 PAN2Q504Q3 1202 aaKnown RBP20.28■□□□□ 0.84
DDR1-241ENST00000460944 RESP18Q5W5W9 173 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 IQUBQ8NA54 791 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 SPIRE2Q8WWL2 714 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 DHX58Q96C10 678 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 PGBD4Q96DM1 585 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 SAMD11Q96NU1 681 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 PYM1Q9BRP8 204 aaKnown RBP20.28■□□□□ 0.84
DDR1-241ENST00000460944 TRIM6Q9C030 488 aaPredicted RBP20.28■□□□□ 0.84
DDR1-241ENST00000460944 LRRC27Q9C0I9 530 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 CCDC113Q9H0I3 377 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 ZHX3Q9H4I2 956 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 PARVGQ9HBI0 331 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 RWDD3Q9Y3V2 267 aa20.28■□□□□ 0.84
DDR1-241ENST00000460944 H0YCG3 227 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 ACKR2O00590 384 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 GIT2Q14161 759 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 GRIN2CQ14957 1233 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 ZNF598Q86UK7 904 aaKnown RBP20.27■□□□□ 0.84
DDR1-241ENST00000460944 MYCT1Q8N699 235 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 CNNM3Q8NE01 707 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 ARNTL2Q8WYA1 636 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 TMEM117Q9H0C3 514 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 TMEM134Q9H6X4 195 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 CERS4Q9HA82 394 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 ARHGAP28Q9P2N2 729 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 PCDHB2Q9Y5E7 798 aa20.27■□□□□ 0.84
DDR1-241ENST00000460944 N4BP3O15049 544 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 SLC16A4O15374 487 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 ZNF623O75123 536 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 ATF7P17544 494 aaPredicted RBP20.26■□□□□ 0.83
DDR1-241ENST00000460944 GATMP50440 423 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 ERVK-21P61565 698 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 ADALQ6DHV7 355 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 SLC27A1Q6PCB7 646 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 DYMQ7RTS9 669 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 HACE1Q8IYU2 909 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 RSPH1Q8WYR4 309 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 DDX12PQ92771 950 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 GUCD1Q96NT3 240 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 GAS2L1Q99501 681 aaPredicted RBP20.26■□□□□ 0.83
DDR1-241ENST00000460944 CDX2Q99626 313 aaPredicted RBP20.26■□□□□ 0.83
DDR1-241ENST00000460944 ADPGKQ9BRR6 497 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 NTPCRQ9BSD7 190 aaKnown RBP20.26■□□□□ 0.83
DDR1-241ENST00000460944 TNMDQ9H2S6 317 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 MAGEF1Q9HAY2 307 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 CHD9Q3L8U1 2897 aa20.26■□□□□ 0.83
DDR1-241ENST00000460944 A0A1B0GUA9 196 aa20.25■□□□□ 0.83
DDR1-241ENST00000460944 POLR2DO15514 142 aaKnown RBP20.25■□□□□ 0.83
DDR1-241ENST00000460944 ZNF131P52739 623 aa20.25■□□□□ 0.83
DDR1-241ENST00000460944 STRN3Q13033 797 aa20.25■□□□□ 0.83
DDR1-241ENST00000460944 E2F4Q16254 413 aa20.25■□□□□ 0.83
DDR1-241ENST00000460944 SPOUT1Q5T280 376 aaKnown RBP20.25■□□□□ 0.83
DDR1-241ENST00000460944 APBB1IPQ7Z5R6 666 aaPredicted RBP20.25■□□□□ 0.83
DDR1-241ENST00000460944 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
DDR1-241ENST00000460944 MYMKA6NI61 221 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 K7ENM7 598 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 NPTXRO95502 500 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 ITGA4P13612 1032 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 SCP2P22307 547 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 CMA1P23946 247 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 CTNNB1P35222 781 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 NCKAP1LP55160 1127 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 AMPD3Q01432 767 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 GLB1LQ6UWU2 654 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 LRRC43Q8N309 656 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 FBXO22Q8NEZ5 403 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 HELQQ8TDG4 1101 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 MYLIPQ8WY64 445 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 LPPQ93052 612 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 C17orf80Q9BSJ5 609 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 EIF2AQ9BY44 585 aaKnown RBP20.24■□□□□ 0.83
DDR1-241ENST00000460944 MRPL9Q9BYD2 267 aaKnown RBP20.24■□□□□ 0.83
DDR1-241ENST00000460944 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
DDR1-241ENST00000460944 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 CHMP5Q9NZZ3 219 aa20.24■□□□□ 0.83
DDR1-241ENST00000460944 MRPL42Q9Y6G3 142 aaKnown RBP20.24■□□□□ 0.83
DDR1-241ENST00000460944 KIAA1671Q9BY89 1806 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms