RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
PCYT1A-213ENST00000460827 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-213ENST00000460827 FASNP49327 2511 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-213ENST00000460827 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 LRRN2O75325 713 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 RFPL2O75678 378 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 STAMQ92783 540 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 LENG9Q96B70 501 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 CEP89Q96ST8 783 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 SAMM50Q9Y512 469 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
PCYT1A-213ENST00000460827 SPEGQ15772 3267 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 A0A087WZ62 844 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 C2CD2LO14523 706 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 INPPL1O15357 1258 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 TEX28O15482 410 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 EFEMP2O95967 443 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 SKIP12755 728 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 LAMP2P13473 410 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 HTR4Q13639 388 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 TAS1R1Q7RTX1 841 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 SMG7Q92540 1137 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 FDXACB1Q9BRP7 624 aaPredicted RBP13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 DISC1Q9NRI5 854 aa13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 PIN4Q9Y237 131 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-213ENST00000460827 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 SLC27A2O14975 620 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 SOD2P04179 222 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 ADH1AP07327 375 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 MYBP10242 640 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 CIITAP33076 1130 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 RAB27AP51159 221 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 AK2P54819 239 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 STARD6P59095 220 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 PRR16Q569H4 304 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 RBM28Q9NW13 759 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
PCYT1A-213ENST00000460827 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 NRP1O14786 923 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 EDIL3O43854 480 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 STBD1O95210 358 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 GLUD1P00367 558 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 ALDH2P05091 517 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 URODP06132 367 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 SPATA31D3P0C874 917 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 RTN1Q16799 776 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 SPATA31D4Q6ZUB0 917 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 URGCPQ8TCY9 931 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 RPP25Q9BUL9 199 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 RXFP1Q9HBX9 757 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-213ENST00000460827 TDRD15B5MCY1 1934 aaKnown RBP13.07□□□□□ -0.32
PCYT1A-213ENST00000460827 SDK1Q7Z5N4 2213 aa13.07□□□□□ -0.32
PCYT1A-213ENST00000460827 SPTLC1O15269 473 aa13.07□□□□□ -0.32
PCYT1A-213ENST00000460827 MSH4O15457 936 aa13.07□□□□□ -0.32
PCYT1A-213ENST00000460827 MTERF2Q49AM1 385 aa13.07□□□□□ -0.32
PCYT1A-213ENST00000460827 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms