RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZFYVE27Q5T4F4 411 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 PRAMEF18Q5VWM3 479 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 USP45Q70EL2 814 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 STK32CQ86UX6 486 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 TRIM48Q8IWZ4 208 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 THEMISQ8N1K5 641 aaPredicted RBP3.69□□□□□ -1.82
HPS3-203ENST00000460822 PHOSPHO1Q8TCT1 267 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 AUTS2Q8WXX7 1259 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 FERMT2Q96AC1 680 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 MVB12AQ96EY5 273 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 KCTD10Q9H3F6 313 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 SMOC1Q9H4F8 434 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 NLRC4Q9NPP4 1024 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 DPP7Q9UHL4 492 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 PCDHGB6Q9Y5F9 930 aa3.69□□□□□ -1.82
HPS3-203ENST00000460822 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 UBA6A0AVT1 1052 aaPredicted RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 PRSS38A1L453 326 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 RPL13P26373 211 aaKnown RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 CNR2P34972 360 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 AK2P54819 239 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 CCT2P78371 535 aaKnown RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 MRPS9P82933 396 aaKnown RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 STK3Q13188 491 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 RAPGEF1Q13905 1077 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 KIAA0753Q2KHM9 967 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 MUM1Q2TAK8 710 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 MBNL2Q5VZF2 373 aaKnown RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 ANO1Q5XXA6 986 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 CYP4F22Q6NT55 531 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 BORAQ6PGQ7 559 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 C1orf228Q6PIY5 440 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 UNQ6494/PRO21346Q6UXR6 183 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 RTN4RL1Q86UN2 441 aaPredicted RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 DENND1CQ8IV53 801 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 FAM186BQ8IYM0 893 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 ADAMTS17Q8TE56 1095 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 CLEC4DQ8WXI8 215 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 ASB15Q8WXK1 588 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 COA7Q96BR5 231 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 FOXRED1Q96CU9 486 aaPredicted RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 CLIC6Q96NY7 704 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 GBP4Q96PP9 640 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 TUBGCP5Q96RT8 1024 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 WRNIP1Q96S55 665 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 MYL10Q9BUA6 226 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 APOL5Q9BWW9 433 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 PRDM12Q9H4Q4 367 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 GNL3LQ9NVN8 582 aaKnown RBP3.68□□□□□ -1.82
HPS3-203ENST00000460822 DTLQ9NZJ0 730 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 FNIP2Q9P278 1114 aa3.68□□□□□ -1.82
HPS3-203ENST00000460822 ST20-MTHFSA0A0A6YYL1 179 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 H3BML4 177 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 K7ESM1 405 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 NOBOXO60393 691 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 DTNBO60941 627 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TADA3O75528 432 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 PRPF6O94906 941 aaKnown RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 CYP1A1P04798 512 aaPredicted RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 ALDH5A1P51649 535 aaPredicted RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 ITGA1P56199 1179 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 LGALS4P56470 323 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 CDK17Q00537 523 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 DLX2Q07687 328 aaPredicted RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 CHAF1AQ13111 956 aaPredicted RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 TRIM25Q14258 630 aaKnown RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 FAM26FQ5R3K3 315 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 PRAMEF9Q5VWM5 478 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 MCTP2Q6DN12 878 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 ZNF761Q86XN6 746 aaPredicted RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 IFNL2Q8IZJ0 200 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 HIPK4Q8NE63 616 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TSPEARQ8WU66 669 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 UBE2Q2Q8WVN8 375 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 PPM1EQ8WY54 764 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 C1GALT1C1Q96EU7 318 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 BORCS6Q96GS4 357 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 RAX2Q96IS3 184 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 MYD88Q99836 296 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 B3GNT5Q9BYG0 378 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TMEM60Q9H2L4 133 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 ASH2LQ9UBL3 628 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TCRBV5S2A0A599 114 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 MROH6A6NGR9 719 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 ACOT7O00154 380 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 DDX3XO00571 662 aaKnown RBP eCLIP3.67□□□□□ -1.82
HPS3-203ENST00000460822 NPHP1O15259 732 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 B3GALT2O43825 422 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 PQBP1O60828 265 aaKnown RBP3.67□□□□□ -1.82
HPS3-203ENST00000460822 TUSC2O75896 110 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 PRLP01236 227 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 HRGP04196 525 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 ALDH2P05091 517 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TM4SF4P48230 202 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 SLC16A1P53985 500 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 KRTAP10-2P60368 255 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 HERVK_113P62684 666 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 GRIN1Q05586 938 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 SPATS1Q496A3 300 aa3.67□□□□□ -1.82
HPS3-203ENST00000460822 TTC38Q5R3I4 469 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms