RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 ERLIN2O94905 339 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 AXLP30530 894 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 CAPSQ13938 189 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 NOSTRINQ8IVI9 506 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 MRPL43Q8N983 215 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 IGSF21Q96ID5 467 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 USP15Q9Y4E8 981 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 A0A087WWV3 80 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 DCXO43602 365 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 MED24O75448 989 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 GALTP07902 379 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 OR52Z1P0C646 297 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 GLRA2P23416 452 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 TECP42680 631 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 ZNF174Q15697 407 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 AMHR2Q16671 573 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 TTC38Q5R3I4 469 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 ZNF280BQ86YH2 543 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 SUSD6Q92537 303 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 ZBP1Q9H171 429 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 UBN1Q9NPG3 1134 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 DNAJB4Q9UDY4 337 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 IRAK3Q9Y616 596 aa13.12□□□□□ -0.31
SOX2-OT-201ENST00000460739 FAM86C2PA6NEL3 165 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 LOC730098B7Z3J9 87 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 INPPL1O15357 1258 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 B4GALT3O60512 393 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 DDHD2O94830 711 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 HOXB8P17481 243 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 RPA1P27694 616 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 SLC11A1P49279 550 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 RABEP1Q15276 862 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 C4orf32Q8N8J7 132 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 ERMNQ8TAM6 284 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 BCL7CQ8WUZ0 217 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 CSRNP2Q9H175 543 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 IPPQ9Y573 584 aa13.11□□□□□ -0.31
SOX2-OT-201ENST00000460739 PRR33A8MZF0 331 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 CXCL14O95715 111 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 CTSAP10619 480 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 ITGA4P13612 1032 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 MUTP22033 750 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 GIT2Q14161 759 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 SYCE2Q6PIF2 218 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 CASP10Q92851 521 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 CPB2Q96IY4 423 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 TMEM175Q9BSA9 504 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 PHF7Q9BWX1 381 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 VN1R3Q9BXE9 311 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 NOL7Q9UMY1 257 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 HCFC2Q9Y5Z7 792 aa13.1□□□□□ -0.31
SOX2-OT-201ENST00000460739 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
SOX2-OT-201ENST00000460739 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms