RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 GYS1P13807 737 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
CPNE6-202ENST00000460657 PTGISQ16647 500 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 Q4G0T1 1027 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 RIT2Q99578 217 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 MIS12Q9H081 205 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 UVRAGQ9P2Y5 699 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 TRAF3IP3Q9Y228 551 aa12.92□□□□□ -0.34
CPNE6-202ENST00000460657 KIF13AQ9H1H9 1805 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 P4HA2O15460 535 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 FAM107AO95990 144 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 SHMT1P34896 483 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 NPEPPSP55786 919 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 HDLBPQ00341 1268 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 GRIK5Q16478 980 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 LRRC55Q6ZSA7 311 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 HEMGNQ9BXL5 484 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 ATP6V0A4Q9HBG4 840 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 SEC24CP53992 1094 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 NPY5RQ15761 445 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 KSR1Q8IVT5 923 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 TAB3Q8N5C8 712 aaPredicted RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 AGTP01019 485 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 KRT81Q14533 505 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 SERPINA10Q9UK55 444 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 A0A0A6YYK5 440 aaPredicted RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 GTPBP10A4D1E9 387 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 GOLGA8SH3BPF8 625 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 MYBL1P10243 752 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 PLS3P13797 630 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 RASA3Q14644 834 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
CPNE6-202ENST00000460657 C11orf70Q9BRQ4 267 aa12.91□□□□□ -0.34
CPNE6-202ENST00000460657 EPHB6O15197 1021 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 TJP3O95049 919 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 SLC8A3P57103 927 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 CFAP157Q5JU67 520 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 APTXQ7Z2E3 356 aaKnown RBP12.9□□□□□ -0.34
CPNE6-202ENST00000460657 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 C1orf54Q8WWF1 131 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
CPNE6-202ENST00000460657 RHBDL3P58872 404 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 TBC1D1Q86TI0 1168 aaPredicted RBP12.9□□□□□ -0.34
CPNE6-202ENST00000460657 SNF8Q96H20 258 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 FGFR4P22455 802 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 CENPUQ71F23 418 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 OLFML3Q9NRN5 406 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 GABBR1Q9UBS5 961 aa12.9□□□□□ -0.34
CPNE6-202ENST00000460657 CD58P19256 250 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 FECHP22830 423 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PSMC6P62333 389 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SCYL2Q6P3W7 929 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 GPD1LQ8N335 351 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 GAKO14976 1311 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 CES2O00748 559 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 BRAFP15056 766 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 COMTP21964 271 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 MUTP22033 750 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 CA4P22748 312 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 YWHAGP61981 247 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPNE6-202ENST00000460657 KRT17Q04695 432 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 RHOT1Q8IXI2 618 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 MXRA8Q9BRK3 442 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 THAP2Q9H0W7 228 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 INHBAP08476 426 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TRIM72Q6ZMU5 477 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PASD1Q8IV76 773 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 MAP7D3Q8IWC1 876 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SRRM1Q8IYB3 904 aaKnown RBP12.89□□□□□ -0.35
CPNE6-202ENST00000460657 BAP1Q92560 729 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 XPO6Q96QU8 1125 aaKnown RBP12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PCDHA10Q9Y5I2 948 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms