RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RNF216Q9NWF9 866 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-209ENST00000460573 SEL1LQ9UBV2 794 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 DENND3A2RUS2 1198 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 ENPP3O14638 875 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 ABCD1P33897 745 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 WDR5P61964 334 aaKnown RBP24.76■■□□□ 1.55
C9orf3-209ENST00000460573 UBE2HP62256 183 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 FAM160A1Q05DH4 1040 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 MAPK6Q16659 721 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 STAMQ92783 540 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 KCNN1Q92952 543 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 FZD8Q9H461 694 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 ZHX3Q9H4I2 956 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 C1orf112Q9NSG2 853 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 DACT1Q9NYF0 836 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 ARHGAP28Q9P2N2 729 aa24.76■■□□□ 1.55
C9orf3-209ENST00000460573 FRMD3A2A2Y4 597 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 K7ERI5 159 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 TLL1O43897 1013 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 TRAK2O60296 914 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 AMHP03971 560 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 CA3P07451 260 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 MAPTP10636 758 aaKnown RBP24.75■■□□□ 1.55
C9orf3-209ENST00000460573 FGFR4P22455 802 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 DSC3Q14574 896 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 KRBA2Q6ZNG9 492 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 CCDC65Q8IXS2 484 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 FMR1NBQ8N0W7 255 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-209ENST00000460573 MICALL1Q8N3F8 863 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 CNNM3Q8NE01 707 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 ENGASEQ8NFI3 743 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 PAGE5Q96GU1 130 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 RGS18Q9NS28 235 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 AGPAT5Q9NUQ2 364 aa24.75■■□□□ 1.55
C9orf3-209ENST00000460573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.74■■□□□ 1.55
C9orf3-209ENST00000460573 PRPF40AO75400 957 aaKnown RBP24.74■■□□□ 1.55
C9orf3-209ENST00000460573 IDEP14735 1019 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 AFMP43652 599 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 NCKAP1LP55160 1127 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 HERC6Q8IVU3 1022 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 ADAM2Q99965 735 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 CCDC113Q9H0I3 377 aa24.74■■□□□ 1.55
C9orf3-209ENST00000460573 PIN4Q9Y237 131 aaKnown RBP24.74■■□□□ 1.55
C9orf3-209ENST00000460573 ADGRA3Q8IWK6 1321 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 ACKR2O00590 384 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 SLC16A4O15374 487 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 SNW1Q13573 536 aaKnown RBP24.73■■□□□ 1.55
C9orf3-209ENST00000460573 AMHR2Q16671 573 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 SLC24A5Q71RS6 500 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 RTN4RL1Q86UN2 441 aaPredicted RBP24.73■■□□□ 1.55
C9orf3-209ENST00000460573 FAM178BQ8IXR5 827 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 TMEM161BQ8NDZ6 487 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 CCDC51Q96ER9 411 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 TIGD1Q96MW7 591 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 TRAIPQ9BWF2 469 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 PANK4Q9NVE7 773 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 MYH11P35749 1972 aa24.73■■□□□ 1.55
C9orf3-209ENST00000460573 PVALEFA0A1B0GWK0 134 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 GOLGA6L22H0YM25 854 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 GTPBP6O43824 516 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-209ENST00000460573 MGEA5O60502 916 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 TSPAN1O60635 241 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 GADD45BO75293 160 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-209ENST00000460573 PRKCBP05771 671 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 HOXA11P31270 313 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-209ENST00000460573 ASIC1P78348 528 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 CCDC85BQ15834 202 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-209ENST00000460573 HERC4Q5GLZ8 1057 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-209ENST00000460573 NOTUMQ6P988 496 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 HAUS6Q7Z4H7 955 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 LINC01599Q8WXQ3 324 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 KIFC3Q9BVG8 833 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 ST6GALNAC4Q9H4F1 302 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 CERS4Q9HA82 394 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 OLFML3Q9NRN5 406 aa24.72■■□□□ 1.55
C9orf3-209ENST00000460573 MICAL3Q7RTP6 2002 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 CNTNAP2Q9UHC6 1331 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 SKIP12755 728 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 SARSP49591 514 aaKnown RBP24.71■■□□□ 1.55
C9orf3-209ENST00000460573 STRN3Q13033 797 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 PRPF4BQ13523 1007 aaKnown RBP24.71■■□□□ 1.55
C9orf3-209ENST00000460573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.71■■□□□ 1.55
C9orf3-209ENST00000460573 UNC13DQ70J99 1090 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 SFR1Q86XK3 245 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 TOP1MTQ969P6 601 aa24.71■■□□□ 1.55
C9orf3-209ENST00000460573 C9IYK1 514 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 K7ENM7 598 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 STAG3L1P0CL83 205 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 RAB27AP51159 221 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 FAM189BP81408 668 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 DEFB103AP81534 67 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 CUL4BQ13620 913 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 TWF2Q6IBS0 349 aaKnown RBP24.7■■□□□ 1.54
C9orf3-209ENST00000460573 ELOA2Q8IYF1 753 aaPredicted RBP24.7■■□□□ 1.54
C9orf3-209ENST00000460573 MYOCDQ8IZQ8 938 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 FIZ1Q96SL8 496 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 BLZF1Q9H2G9 400 aa24.7■■□□□ 1.54
C9orf3-209ENST00000460573 ELAC1Q9H777 363 aaKnown RBP24.7■■□□□ 1.54
C9orf3-209ENST00000460573 HOOK1Q9UJC3 728 aaKnown RBP24.7■■□□□ 1.54
C9orf3-209ENST00000460573 A0A0U1RQF3 1178 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms