RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ACKR2O00590 384 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 PSMA7O14818 248 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 KIAA0391O15091 583 aaKnown RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 GTF2BQ00403 316 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 NFX1Q12986 1120 aaKnown RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 MAPK7Q13164 816 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 PNOCQ13519 176 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 PRPF4BQ13523 1007 aaKnown RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 HIC1Q14526 733 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 KMT5BQ4FZB7 885 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ZNF658Q5TYW1 1059 aaPredicted RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 SLFN12LQ6IEE8 588 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ZPBP2Q6X784 338 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 SFR1Q86XK3 245 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 MYOCDQ8IZQ8 938 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 GPT2Q8TD30 523 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ASAP3Q8TDY4 903 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 OSMRQ99650 979 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ADAMTS10Q9H324 1103 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 MYH15Q9Y2K3 1946 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 N4BP3O15049 544 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 SLC16A4O15374 487 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 CAVIN2O95810 425 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 CHRNA1P02708 482 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 PRKCBP05771 671 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 LIG4P49917 911 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 RAB27AP51159 221 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 DRP2Q13474 957 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 IKBKEQ14164 716 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 PSRC1Q6PGN9 363 aaPredicted RBP12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 DAW1Q8N136 415 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 TSG101Q99816 390 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 FZD8Q9H461 694 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
SMNDC1-203ENST00000460483 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 BICDL2A1A5D9 508 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 CALUO43852 315 aaPredicted RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 FGFR1OPO95684 399 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 RPL13P26373 211 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 SARSP49591 514 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 RGS19P49795 217 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 FPGSQ05932 587 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 MGAT3Q09327 533 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 COBLL1Q53SF7 1204 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 USP37Q86T82 979 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 GUF1Q8N442 669 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 PADI3Q9ULW8 664 aa12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
SMNDC1-203ENST00000460483 CENPFP49454 3210 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 STK25O00506 426 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 CLDN3O15551 220 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 TOM1L1O75674 476 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 GHRP10912 638 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 CYP2C18P33260 490 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 CCL23P55773 120 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 MBTD1Q05BQ5 628 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 EHHADHQ08426 723 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 KNOP1Q1ED39 458 aaKnown RBP12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 DCAF4L1Q3SXM0 396 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 PGBD4Q96DM1 585 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 DHTKD1Q96HY7 919 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms