RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 NOTUMQ6P988 496 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 GLB1LQ6UWU2 654 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 SLC39A11Q8N1S5 342 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 SMG8Q8ND04 991 aaKnown RBP18.28■□□□□ 0.52
SHANK2-213ENST00000460048 BSNDQ8WZ55 320 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 PPP2R3CQ969Q6 453 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 CPB2Q96IY4 423 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 MMTAG2Q9BU76 263 aaKnown RBP18.28■□□□□ 0.52
SHANK2-213ENST00000460048 DDX19AQ9NUU7 478 aaKnown RBP18.28■□□□□ 0.52
SHANK2-213ENST00000460048 TBC1D13Q9NVG8 400 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 SPG21Q9NZD8 308 aa18.28■□□□□ 0.52
SHANK2-213ENST00000460048 CNTNAP2Q9UHC6 1331 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
SHANK2-213ENST00000460048 LINC01565O15544 149 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 BCAR1P56945 870 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 DLX2Q07687 328 aaPredicted RBP18.27■□□□□ 0.52
SHANK2-213ENST00000460048 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 CNNM3Q8NE01 707 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 EIF2AQ9BY44 585 aaKnown RBP18.27■□□□□ 0.52
SHANK2-213ENST00000460048 CSRNP2Q9H175 543 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 IGFLR1Q9H665 355 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 RSAD1Q9HA92 442 aa18.27■□□□□ 0.52
SHANK2-213ENST00000460048 PUF60Q9UHX1 559 aaKnown RBP18.27■□□□□ 0.52
SHANK2-213ENST00000460048 GRXCR2A6NFK2 248 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 B4GALT5O43286 388 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 TBX10O75333 385 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 IL9P15248 144 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 CDC25AP30304 524 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SHANK2-213ENST00000460048 FAM187BQ17R55 369 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 PUS10Q3MIT2 529 aaKnown RBP18.26■□□□□ 0.51
SHANK2-213ENST00000460048 KRT79Q5XKE5 535 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
SHANK2-213ENST00000460048 PTCRAQ6ISU1 281 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-213ENST00000460048 EP400NLQ6ZTU2 488 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 MICAL1Q8TDZ2 1067 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 FZD8Q9H461 694 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 INPP5FQ9Y2H2 1132 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 IPPQ9Y573 584 aa18.26■□□□□ 0.51
SHANK2-213ENST00000460048 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 CARNS1A5YM72 827 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 NT5C1B-RDH14C9J2C7 533 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 E9PMD0 336 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 INPPL1O15357 1258 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 B4GALT3O60512 393 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 EYA4O95677 639 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 NAMPTP43490 491 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 NRIP1P48552 1158 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 ALDH7A1P49419 539 aaKnown RBP18.25■□□□□ 0.51
SHANK2-213ENST00000460048 AFF1P51825 1210 aaKnown RBP18.25■□□□□ 0.51
SHANK2-213ENST00000460048 KRT17Q04695 432 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 HYIQ5T013 277 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 RBM23Q86U06 439 aaKnown RBP18.25■□□□□ 0.51
SHANK2-213ENST00000460048 PRIMPOLQ96LW4 560 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 PRMT7Q9NVM4 692 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-213ENST00000460048 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
SHANK2-213ENST00000460048 TRIP11Q15643 1979 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 ZC3H11AO75152 810 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK2-213ENST00000460048 DDHD2O94830 711 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 GLP2RO95838 553 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 GALTP07902 379 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 ITGA4P13612 1032 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 DUSP6Q16828 381 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 KCNK18Q7Z418 384 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 TMEM173Q86WV6 379 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-213ENST00000460048 ZNF280BQ86YH2 543 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 ZBTB8OSQ8IWT0 167 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 URGCPQ8TCY9 931 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 KIFAP3Q92845 792 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 MSLNLQ96KJ4 702 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 CCDC113Q9H0I3 377 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 TLE6Q9H808 572 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 NGRNQ9NPE2 291 aaKnown RBP18.24■□□□□ 0.51
SHANK2-213ENST00000460048 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 DNAJB4Q9UDY4 337 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 HES2Q9Y543 173 aa18.24■□□□□ 0.51
SHANK2-213ENST00000460048 MYH15Q9Y2K3 1946 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 VWA3AA6NCI4 1184 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 PER2O15055 1255 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 SLC11A1P49279 550 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 RNASELQ05823 741 aaKnown RBP18.23■□□□□ 0.51
SHANK2-213ENST00000460048 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 SLC27A1Q6PCB7 646 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 CDR2LQ86X02 465 aaPredicted RBP18.23■□□□□ 0.51
SHANK2-213ENST00000460048 FAM178BQ8IXR5 827 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
SHANK2-213ENST00000460048 PNMA5Q96PV4 448 aa18.23■□□□□ 0.51
SHANK2-213ENST00000460048 CDCA3Q99618 268 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms