RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 KCNG1Q9UIX4 513 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 A0A0U1RQF3 1178 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 GTPBP6O43824 516 aaPredicted RBP24.01■■□□□ 1.43
SSNA1-202ENST00000459860 TSPAN1O60635 241 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 STAT6P42226 847 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 KCNQ1P51787 676 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 EFNA5P52803 228 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 RAD51AP2Q09MP3 1159 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 MCM6Q14566 821 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 MAPK6Q16659 721 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 TMEM132AQ24JP5 1023 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 ABI1Q8IZP0 508 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 CRIPAKQ8N1N5 446 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 ZNF689Q96CS4 500 aaPredicted RBP24.01■■□□□ 1.43
SSNA1-202ENST00000459860 SAMD11Q96NU1 681 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 TRAIPQ9BWF2 469 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 POLD4Q9HCU8 107 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 PHLPP2Q6ZVD8 1323 aa24.01■■□□□ 1.43
SSNA1-202ENST00000459860 COL4A4P53420 1690 aaPredicted RBP24■■□□□ 1.43
SSNA1-202ENST00000459860 CCDC169A6NNP5 214 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 EOMESO95936 686 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 DDIT3P35638 169 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 PEX3P56589 373 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 PAN2Q504Q3 1202 aaKnown RBP24■■□□□ 1.43
SSNA1-202ENST00000459860 SPATA32Q96LK8 384 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 RC3H2Q9HBD1 1191 aaKnown RBP24■■□□□ 1.43
SSNA1-202ENST00000459860 FAM105AQ9NUU6 356 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 ODF2LQ9ULJ1 636 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 RWDD3Q9Y3V2 267 aa24■■□□□ 1.43
SSNA1-202ENST00000459860 KIAA1671Q9BY89 1806 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 PRKCBP05771 671 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 LIG1P18858 919 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 COL9A1P20849 921 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 SMTNP53814 917 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 ERVK-21P61565 698 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 PPP4R3CPQ6ZMV5 832 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 DAW1Q8N136 415 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 PGBD4Q96DM1 585 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 KMT5AQ9NQR1 393 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 FAM13BQ9NYF5 915 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 LARSQ9P2J5 1176 aaKnown RBP23.99■■□□□ 1.43
SSNA1-202ENST00000459860 MTUS1Q9ULD2 1270 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 TCHHQ07283 1943 aa23.99■■□□□ 1.43
SSNA1-202ENST00000459860 MYO9BQ13459 2157 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 TBKBP1A7MCY6 615 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 TBCAO75347 108 aaKnown RBP23.98■■□□□ 1.43
SSNA1-202ENST00000459860 NPTX2P47972 431 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 MAPK7Q13164 816 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 SKIV2LQ15477 1246 aaKnown RBP23.98■■□□□ 1.43
SSNA1-202ENST00000459860 AMHR2Q16671 573 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 FAM187BQ17R55 369 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 AAK1Q2M2I8 961 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 SV2BQ7L1I2 683 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 CNNM3Q8NE01 707 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 LRRC15Q8TF66 581 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 CPB2Q96IY4 423 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 KIFC3Q9BVG8 833 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 TRIM6Q9C030 488 aaPredicted RBP23.98■■□□□ 1.43
SSNA1-202ENST00000459860 RCOR1Q9UKL0 485 aa23.98■■□□□ 1.43
SSNA1-202ENST00000459860 RBM19Q9Y4C8 960 aaKnown RBP23.98■■□□□ 1.43
SSNA1-202ENST00000459860 FAM13AO94988 1023 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 FGFR1P11362 822 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PLS3P13797 630 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 ARF4P18085 180 aaPredicted RBP23.97■■□□□ 1.43
SSNA1-202ENST00000459860 HOXA11P31270 313 aaPredicted RBP23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PRPF4BQ13523 1007 aaKnown RBP23.97■■□□□ 1.43
SSNA1-202ENST00000459860 ARSHQ5FYA8 562 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 HACE1Q8IYU2 909 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PDILTQ8N807 584 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 FBXO22Q8NEZ5 403 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 RSPH1Q8WYR4 309 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 REEP2Q9BRK0 252 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PANK2Q9BZ23 570 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 SCAND2PQ9GZW5 306 aaPredicted RBP23.97■■□□□ 1.43
SSNA1-202ENST00000459860 TMEM117Q9H0C3 514 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 FZD8Q9H461 694 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 CNTNAP2Q9UHC6 1331 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PCDHA7Q9UN72 937 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 COG5Q9UP83 839 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 PCDHB2Q9Y5E7 798 aa23.97■■□□□ 1.43
SSNA1-202ENST00000459860 NPHP3-ACAD11A0A0J9YXS1 232 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 H0YCG3 227 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 K7ERI5 159 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 ACKR2O00590 384 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 CTNNB1P35222 781 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 GATMP50440 423 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 CACNB1Q02641 598 aaPredicted RBP23.96■■□□□ 1.43
SSNA1-202ENST00000459860 SPOUT1Q5T280 376 aaKnown RBP23.96■■□□□ 1.43
SSNA1-202ENST00000459860 SLC27A1Q6PCB7 646 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 ZNF598Q86UK7 904 aaKnown RBP23.96■■□□□ 1.43
SSNA1-202ENST00000459860 C17orf80Q9BSJ5 609 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 CCDC113Q9H0I3 377 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 ZHX3Q9H4I2 956 aa23.96■■□□□ 1.43
SSNA1-202ENST00000459860 SFI1A8K8P3 1242 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 N4BP3O15049 544 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 B4GALT5O43286 388 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 ZNF623O75123 536 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 AXDND1Q5T1B0 1012 aaPredicted RBP23.95■■□□□ 1.42
SSNA1-202ENST00000459860 SHC4Q6S5L8 630 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 TMEM192Q8IY95 271 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms