RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	ZNF235	Q14590	738 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	TRIP4	Q15650	581 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	CENPP	Q6IPU0	288 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MRFAP1L1	Q96HT8	127 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	AGBL1	Q96MI9	1066 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	CDC42BPB	Q9Y5S2	1711 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	ABCA8	O94911	1581 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	GOLGA8M	H3BSY2	632 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SRGAP2	O75044	1071 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	CXCR5	P32302	372 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SLC16A2	P36021	539 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	HDLBP	Q00341	1268 aa	Known RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	FAM196A	Q6ZSG2	479 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	KPNA7	A9QM74	516 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MAP3K13	O43283	966 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	TOMM70	O94826	608 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MLN	P12872	115 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	HMOX2	P30519	316 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	PASD1	Q8IV76	773 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	DYDC2	Q96IM9	177 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MUC3B	Q9H195	1237 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	KANSL2	Q9H9L4	492 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	GPR108	Q9NPR9	543 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MAD2L2	Q9UI95	211 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	MYH11	P35749	1972 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SUPT3H	O75486	399 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	NUP62	P37198	522 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF699	Q32M78	642 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	LRRC8E	Q6NSJ5	796 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SIX5	Q8N196	739 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF280C	Q8ND82	737 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	P2RX5	Q93086	422 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	LSG1	Q9H089	658 aa	Known RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	FYN	P06241	537 aa		12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.82	□□□□□ -0.36
ABCA2-208	ENST00000459850	SERPINB10	P48595	397 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	TBCK	Q8TEA7	893 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	PUS3	Q9BZE2	481 aa	Known RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850		H0Y626	953 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	MEFV	O15553	781 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	KDM1A	O60341	852 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	TRIM16	O95361	564 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ALDH6A1	Q02252	535 aa	Known RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	APBA1	Q02410	837 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	PDIK1L	Q8N165	341 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	STMN3	Q9NZ72	180 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	SAMD9L	Q8IVG5	1584 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	MOCS2	O96007	188 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ARHGEF7	Q14155	803 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	USP6NL	Q92738	828 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	SIK2	Q9H0K1	926 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	VPS11	Q9H270	941 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	BBOX1	O75936	387 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	E2F5	Q15329	346 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	KDELC2	Q7Z4H8	507 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	CCNYL1	Q8N7R7	359 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ACSL3	O95573	720 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	CASP14	P31944	242 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ADD2	P35612	726 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF394	Q53GI3	561 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ALS2CL	Q60I27	953 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	RASGRP4	Q8TDF6	673 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	DHX36	Q9H2U1	1008 aa	Known RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	COPE	O14579	308 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	DYRK3	O43781	588 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	SMAD1	Q15797	465 aa	Known RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF568	Q3ZCX4	644 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF438	Q7Z4V0	828 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ZNF555	Q8NEP9	628 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	RNASE11	Q8TAA1	199 aa	Known RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	PIGS	Q96S52	555 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ADNP	Q9H2P0	1102 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	EPB41L5	Q9HCM4	733 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	GALNT8	Q9NY28	637 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ASAP1	Q9ULH1	1129 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	MDM2	Q00987	491 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	RBL2	Q08999	1139 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	SLFN12L	Q6IEE8	588 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	ARHGEF25	Q86VW2	580 aa		12.81	□□□□□ -0.36
ABCA2-208	ENST00000459850	TADA2A	O75478	443 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	RFX3	P48380	749 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	RNF123	Q5XPI4	1314 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850		A0A0G2JND7	137 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	EIF3D	O15371	548 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	TADA3	O75528	432 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	RALB	P11234	206 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	PHKA2	P46019	1235 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	WDR75	Q8IWA0	830 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	PARVB	Q9HBI1	364 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	LSM7	Q9UK45	103 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	NLRP1	Q9C000	1473 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	TNFAIP2	Q03169	654 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	PIK3R2	O00459	728 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	CLDN3	O15551	220 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	CCT5	P48643	541 aa		12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	FASTKD1	Q53R41	847 aa	Known RBP	12.8	□□□□□ -0.36
ABCA2-208	ENST00000459850	RHPN2	Q8IUC4	686 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms