RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 BRAPQ7Z569 592 aa17.86■□□□□ 0.45
COL7A1-203ENST00000459756 MICAL1Q8TDZ2 1067 aa17.86■□□□□ 0.45
COL7A1-203ENST00000459756 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
COL7A1-203ENST00000459756 BHMT2Q9H2M3 363 aa17.86■□□□□ 0.45
COL7A1-203ENST00000459756 DDX19AQ9NUU7 478 aaKnown RBP17.86■□□□□ 0.45
COL7A1-203ENST00000459756 TBC1D13Q9NVG8 400 aa17.86■□□□□ 0.45
COL7A1-203ENST00000459756 BDP1A6H8Y1 2624 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 MEIS3P2A8K0S8 358 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 ARF4P18085 180 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-203ENST00000459756 PBX3P40426 434 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 BCAR1P56945 870 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 AMHR2Q16671 573 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 ARL6IP4Q66PJ3 421 aaKnown RBP17.85■□□□□ 0.45
COL7A1-203ENST00000459756 CDCA2Q69YH5 1023 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-203ENST00000459756 AGMOQ6ZNB7 445 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-203ENST00000459756 URGCPQ8TCY9 931 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 PRIMPOLQ96LW4 560 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 C2orf40Q9H1Z8 148 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 IGFLR1Q9H665 355 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 RSAD1Q9HA92 442 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 UBN1Q9NPG3 1134 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 KANSL3Q9P2N6 904 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 DNM3Q9UQ16 869 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 INPP5FQ9Y2H2 1132 aa17.85■□□□□ 0.45
COL7A1-203ENST00000459756 FSD2A1L4K1 749 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 PP2D1A8MPX8 630 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 H3BQ06 376 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 FSCN2O14926 492 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 LTBRP36941 435 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 ERVFC1P60507 584 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 RNASELQ05823 741 aaKnown RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 ADAM15Q13444 863 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 PPP2R5AQ15172 486 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 PTCRAQ6ISU1 281 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 ADGRD2Q7Z7M1 963 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 EFHBQ8N7U6 833 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 SMG8Q8ND04 991 aaKnown RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 KIFAP3Q92845 792 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 CPB2Q96IY4 423 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 NECAB3Q96P71 396 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 TLE6Q9H808 572 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 NGRNQ9NPE2 291 aaKnown RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 PRMT7Q9NVM4 692 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-203ENST00000459756 IPPQ9Y573 584 aa17.84■□□□□ 0.45
COL7A1-203ENST00000459756 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 GRXCR2A6NFK2 248 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 B4GALT5O43286 388 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 ZC3H11AO75152 810 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 EYA4O95677 639 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 BMP15O95972 392 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 ITGA4P13612 1032 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 CDC25AP30304 524 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 GTF2F1P35269 517 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 NAMPTP43490 491 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 NRIP1P48552 1158 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 FAM187BQ17R55 369 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 SLC27A1Q6PCB7 646 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 HACE1Q8IYU2 909 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 KCTD17Q8N5Z5 321 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 BSNDQ8WZ55 320 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 IFT74Q96LB3 600 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 TCF25Q9BQ70 676 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 MMTAG2Q9BU76 263 aaKnown RBP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 EIF2AQ9BY44 585 aaKnown RBP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-203ENST00000459756 FZD8Q9H461 694 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 FAM50BQ9Y247 325 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 PCDHGC5Q9Y5F6 944 aa17.83■□□□□ 0.44
COL7A1-203ENST00000459756 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-203ENST00000459756 VWA3AA6NCI4 1184 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 E9PMD0 336 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 MAPK6Q16659 721 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 HYIQ5T013 277 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 DEPTORQ8TB45 409 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM169Q96HH4 297 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 CDCA3Q99618 268 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-203ENST00000459756 NRDE2Q9H7Z3 1164 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 ENTPD7Q9NQZ7 604 aa17.82■□□□□ 0.44
COL7A1-203ENST00000459756 INPPL1O15357 1258 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 LINC01565O15544 149 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 TBX10O75333 385 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 GALTP07902 379 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 NDUFV1P49821 464 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 EFNA5P52803 228 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 DLX2Q07687 328 aaPredicted RBP17.81■□□□□ 0.44
COL7A1-203ENST00000459756 BMS1Q14692 1282 aaKnown RBP17.81■□□□□ 0.44
COL7A1-203ENST00000459756 PLPP4Q5VZY2 271 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
COL7A1-203ENST00000459756 AK8Q96MA6 479 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
COL7A1-203ENST00000459756 CCDC113Q9H0I3 377 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 NT5C3AQ9H0P0 336 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 GBP3Q9H0R5 595 aa17.81■□□□□ 0.44
COL7A1-203ENST00000459756 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
COL7A1-203ENST00000459756 ZMYM2Q9UBW7 1377 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms