RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 AGO4Q9HCK5 861 aaKnown RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 EHD2Q9NZN4 543 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 PACSIN2Q9UNF0 486 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CNTNAP1P78357 1384 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 NDC80O14777 642 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ZBED4O75132 1171 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FAM107AO95990 144 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 KRT14P02533 472 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 PAEPP09466 180 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 NUDT17P0C025 328 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ARP10275 920 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 CTNNA2P26232 953 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ATP5DP30049 168 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 YWHABP31946 246 aaKnown RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 LSP1P33241 339 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ECE1P42892 770 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 CCT5P48643 541 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FNTAP49354 379 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 PDE6CP51160 858 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 OAZ1P54368 228 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 BPIFB4P59827 614 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 IFFO1Q0D2I5 559 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ITGB3BPQ13352 177 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 PLCB4Q15147 1175 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 TKFCQ3LXA3 575 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 KRT39Q6A163 491 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ZNF746Q6NUN9 644 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 CYFIP1Q7L576 1253 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 HAUS6Q7Z4H7 955 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 NLRX1Q86UT6 975 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ZNF677Q86XU0 584 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 NIM1KQ8IY84 436 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 C10orf67Q8IYJ2 551 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FAM71AQ8IYT1 594 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 LARGE2Q8N3Y3 721 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 MCPH1Q8NEM0 835 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ACER1Q8TDN7 264 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 KCNN1Q92952 543 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ARL8AQ96BM9 186 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ZSWIM1Q9BR11 485 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ERP44Q9BS26 406 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 GPR88Q9GZN0 384 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 TMEM8AQ9HCN3 771 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 KCNH7Q9NS40 1196 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 HOMER3Q9NSC5 361 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 SEPT11Q9NVA2 429 aaKnown RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 HSPBP1Q9NZL4 362 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 CTTNBP2NLQ9P2B4 639 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 PCYOX1Q9UHG3 505 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 FAM153AQ9UHL3 310 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 GTF3C4Q9UKN8 822 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 COQ4Q9Y3A0 265 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 SAMM50Q9Y512 469 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 RBBP6Q7Z6E9 1792 aaKnown RBP9.54□□□□□ -0.88
HDAC3-202ENST00000459727 EMSYQ7Z589 1322 aa9.54□□□□□ -0.88
HDAC3-202ENST00000459727 ESYT3A0FGR9 886 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 TRIM49P0CI25 452 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 TRIM49CP0CI26 452 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ITGB5P18084 799 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ECHS1P30084 290 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 INPP5BP32019 993 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 GPC3P51654 580 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 CAV1Q03135 178 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ADCY2Q08462 1091 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ZNF844Q08AG5 666 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 KCNA1Q09470 495 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 BYSLQ13895 437 aaKnown RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 PTGISQ16647 500 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 CYP1B1Q16678 543 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ODF2Q5BJF6 829 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 DENND2CQ68D51 928 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 DUPD1Q68J44 220 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 MAP4K3Q8IVH8 894 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 DAW1Q8N136 415 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 UBLCP1Q8WVY7 318 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SHC3Q92529 594 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SLCO2A1Q92959 643 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 GPRASP2Q96D09 838 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 NT5C1BQ96P26 610 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 TMEM109Q9BVC6 243 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 AP1M1Q9BXS5 423 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 DDX47Q9H0S4 455 aaKnown RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ACTR5Q9H9F9 607 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 UBE2TQ9NPD8 197 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 STK32BQ9NY57 414 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms