RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 STAMQ92783 540 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 FAM167AQ96KS9 214 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 COL4A3Q01955 1670 aa12.69□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CARNS1A5YM72 827 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SMCO2A6NFE2 343 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 DDHD2O94830 711 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 OATP04181 439 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 MCM2P49736 904 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ATXN1P54253 815 aaKnown RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 UGCGQ16739 394 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 DCLRE1AQ6PJP8 1040 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SMG7Q92540 1137 aaKnown RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ZNF707Q96C28 371 aaPredicted RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TRAIPQ9BWF2 469 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CHST12Q9NRB3 414 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TBC1D22BQ9NU19 505 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NCDNQ9UBB6 729 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TCEAL9Q9UHQ7 104 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ACACBO00763 2458 aa12.68□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ADAMTS3O15072 1205 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TEX28O15482 410 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 URODP06132 367 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 AK2P54819 239 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 FUT2Q10981 343 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 HTR4Q13639 388 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 GET4Q7L5D6 327 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SNX21Q969T3 373 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NXPE3Q969Y0 559 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NUMBLQ9Y6R0 609 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SPTBN2O15020 2390 aa12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 MYH9P35579 1960 aaKnown RBP12.67□□□□□ -0.38
PRAMEF35P-201ENST00000458709 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 A0A087WZ62 844 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ANHXE9PGG2 379 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 GLUD1P00367 558 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SOD2P04179 222 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ADH1AP07327 375 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CYP3A4P08684 503 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SPATA31D3P0C874 917 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SKIP12755 728 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 LAMP2P13473 410 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SFPQP23246 707 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ST3GAL2Q16842 350 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SPATA31D4Q6ZUB0 917 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TAS1R1Q7RTX1 841 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 FDXACB1Q9BRP7 624 aaPredicted RBP12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SLC2A4RGQ9NR83 387 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PDRG1Q9NUG6 133 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CACNA1IQ9P0X4 2223 aa12.66□□□□□ -0.38
PRAMEF35P-201ENST00000458709 DCDC2BA2VCK2 349 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TMEM150BA6NC51 233 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NRP1O14786 923 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SPTLC1O15269 473 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 ZNF623O75123 536 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 RAB27AP51159 221 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NEK4P51957 841 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 STARD6P59095 220 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 TARBP2Q15633 366 aaKnown RBP12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PRR16Q569H4 304 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CYP26C1Q6V0L0 522 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 Q6ZUG5 572 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 URGCPQ8TCY9 931 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 LENG9Q96B70 501 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SH2D3AQ9BRG2 576 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 PIDD1Q9HB75 910 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 SPATA6Q9NWH7 488 aaPredicted RBP12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 STK39Q9UEW8 545 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 CDV3Q9UKY7 258 aaKnown RBP12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.38
PRAMEF35P-201ENST00000458709 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms