RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DHX58Q96C10 678 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 IFT74Q96LB3 600 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 DRC1Q96MC2 740 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 ADAM2Q99965 735 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 REEP2Q9BRK0 252 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 FZD8Q9H461 694 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 CUEDC2Q9H467 287 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 UNC80Q8N2C7 3258 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 ADGRA3Q8IWK6 1321 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 LRRIQ4A6NIV6 560 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 AMHP03971 560 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 PLS3P13797 630 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 PFKFB1P16118 471 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
ATG4A-206ENST00000457035 SFPQP23246 707 aaKnown RBP eCLIP11.1□□□□□ -0.63
ATG4A-206ENST00000457035 FAM187BQ17R55 369 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 CATSPER4Q7RTX7 472 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 HERC6Q8IVU3 1022 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 MYLIPQ8WY64 445 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 STAMQ92783 540 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 COL25A1Q9BXS0 654 aaPredicted RBP11.1□□□□□ -0.63
ATG4A-206ENST00000457035 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 KCNG1Q9UIX4 513 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 EYSQ5T1H1 3165 aa11.1□□□□□ -0.63
ATG4A-206ENST00000457035 DENND3A2RUS2 1198 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 ACKR2O00590 384 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TSPAN1O60635 241 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 GJB5O95377 273 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 AXLP30530 894 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 PBX2P40425 430 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 NDUFA8P51970 172 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 RABGGTBP53611 331 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 DMP1Q13316 513 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 LONRF3Q496Y0 759 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 ZBTB8OSQ8IWT0 167 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 DEPTORQ8TB45 409 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 KCNN1Q92952 543 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CCDC113Q9H0I3 377 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 C2orf40Q9H1Z8 148 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TNMDQ9H2S6 317 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 GOLPH3LQ9H4A5 285 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 KMT5AQ9NQR1 393 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 C1orf112Q9NSG2 853 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
ATG4A-206ENST00000457035 SERTAD1Q9UHV2 236 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
ATG4A-206ENST00000457035 CDH23Q9H251 3354 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 A0A0U1RQF3 1178 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 A0A1B0GUA9 196 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 K7ERI5 159 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 SLC16A4O15374 487 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 B4GALT5O43286 388 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF623O75123 536 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 FAM13AO94988 1023 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 UPP2O95045 317 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF202O95125 648 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 EDN1P05305 212 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 KRT18P05783 430 aaKnown RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 FOSL2P15408 326 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 SYKP43405 635 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 EFNA5P52803 228 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 SMTNP53814 917 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 EMP3P54852 163 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 AMPD3Q01432 767 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 MAPK6Q16659 721 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms