RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 UNC5CO95185 931 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 ACSL3O95573 720 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 FMO5P49326 533 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 INTS8Q75QN2 995 aaKnown RBP14.74□□□□□ -0.05
PTPRE-204ENST00000455661 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 MORC4Q8TE76 937 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 KRT35Q92764 455 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 MAGEB18Q96M61 343 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
PTPRE-204ENST00000455661 GLT8D2Q9H1C3 349 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 MLXIPLQ9NP71 852 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 NKIRAS1Q9NYS0 192 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 TAS2R14Q9NYV8 317 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 STK24Q9Y6E0 443 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 MEIS1O00470 390 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 ECEL1O95672 775 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 BRAFP15056 766 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 PSMC6P62333 389 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 LMNB2Q03252 620 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 BIRC2Q13490 618 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 ACVR2BQ13705 512 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 SETDB1Q15047 1291 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 CYP1B1Q16678 543 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 LMNTD2Q8IXW0 634 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 AGPAT1Q99943 283 aa14.73□□□□□ -0.05
PTPRE-204ENST00000455661 PPP1R11O60927 126 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 SNHG28P0DPA3 235 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 RRP1BQ14684 758 aaKnown RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 PARP6Q2NL67 630 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 BORCS6Q96GS4 357 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 RMDN2Q96LZ7 410 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 APEX2Q9UBZ4 518 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 FAM170AA1A519 330 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 EME2A4GXA9 379 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 ANKRD63C9JTQ0 380 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 HGSO14964 777 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 ZBTB5O15062 677 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 NEFHP12036 1026 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 CREB1P16220 341 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 RPA1P27694 616 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 GPC5P78333 572 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 STRN3Q13033 797 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 RBBP5Q15291 538 aaKnown RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 MTFR1Q15390 333 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 ARHGAP44Q17R89 818 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 TRIM68Q6AZZ1 485 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 SLC13A5Q86YT5 568 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 INTS2Q9H0H0 1204 aaKnown RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 WHRNQ9P202 907 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 LRRC42Q9Y546 428 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
PTPRE-204ENST00000455661 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
PTPRE-204ENST00000455661 FTLP02792 175 aaPredicted RBP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 LINGO3P0C6S8 592 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 GAP43P17677 238 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 COMTP21964 271 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ABL2P42684 1182 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 MESDQ14696 234 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 KIF22Q14807 665 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 GRIK5Q16478 980 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 PPP1R21Q6ZMI0 780 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 MIGA2Q7L4E1 593 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 VSIG1Q86XK7 387 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 AGGF1Q8N302 714 aaeCLIP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 SPDYE1Q8NFV5 336 aaPredicted RBP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 MKNK1Q9BUB5 465 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 PITPNM3Q9BZ71 974 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 GPR88Q9GZN0 384 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 RNPEPL1Q9HAU8 725 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 FRMPD4Q14CM0 1322 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 CYP3A7-CYP3A51PA0A087WV96 503 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 RSPH10B2B2RC85 870 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 RSPH10BP0C881 870 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 BCRP11274 1271 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ITIH2P19823 946 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ATP4AP20648 1035 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 CALB2P22676 271 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 CYP3A7P24462 503 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 PCK1P35558 622 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 MARCKSL1P49006 195 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 PEX5P50542 639 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 CTTNQ14247 550 aaKnown RBP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 TCEAL1Q15170 157 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ZNF568Q3ZCX4 644 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ECHDC2Q86YB7 292 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 APLFQ8IW19 511 aaPredicted RBP14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ZDHHC14Q8IZN3 488 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 PIGOQ8TEQ8 1089 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 ARHGEF10LQ9HCE6 1279 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 FRMD4BQ9Y2L6 1034 aa14.71□□□□□ -0.05
PTPRE-204ENST00000455661 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms