RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 SELPP16109 830 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 THPOP40225 353 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 KCNA1Q09470 495 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 STRN3Q13033 797 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 PAK1Q13153 545 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 EDRF1Q3B7T1 1238 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
TRAF4-206ENST00000454852 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 P2RX5Q93086 422 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 MED15Q96RN5 788 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 NOC4LQ9BVI4 516 aaKnown RBP12.36□□□□□ -0.43
TRAF4-206ENST00000454852 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-206ENST00000454852 SEMA6BQ9H3T3 888 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
TRAF4-206ENST00000454852 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
TRAF4-206ENST00000454852 BICDL2A1A5D9 508 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 IKBKBO14920 756 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 PRKCBP05771 671 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 CLTBP09497 229 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 PROZP22891 400 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 SFPQP23246 707 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAF4-206ENST00000454852 AXLP30530 894 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 ANO6Q4KMQ2 910 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 FBXO47Q5MNV8 452 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 TTI2Q6NXR4 508 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-206ENST00000454852 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
TRAF4-206ENST00000454852 TMEM40Q8WWA1 233 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 OSMRQ99650 979 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
TRAF4-206ENST00000454852 DNAJC25Q9H1X3 360 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
TRAF4-206ENST00000454852 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 ABLIM1O14639 778 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
TRAF4-206ENST00000454852 TSPAN1O60635 241 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 TOM1L1O75674 476 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 EDN1P05305 212 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 GARTP22102 1010 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 ZNF165P49910 485 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-206ENST00000454852 MBTPS1Q14703 1052 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 LRRC8DQ7L1W4 858 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 FAM228AQ86W67 206 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 NELFBQ8WX92 580 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
TRAF4-206ENST00000454852 CHST12Q9NRB3 414 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 AGPAT5Q9NUQ2 364 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 ATP11BQ9Y2G3 1177 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
TRAF4-206ENST00000454852 HNRNPDLO14979 420 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 GPR182O15218 404 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 CXCL10P02778 98 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 ADSSP30520 456 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 HOXA11P31270 313 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 RFC2P35250 354 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 LPIN1Q14693 890 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 GPNMBQ14956 572 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 NCAPHQ15003 741 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 IQCB1Q15051 598 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 SLFN12LQ6IEE8 588 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 SLC39A4Q6P5W5 647 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 FBXL18Q96ME1 805 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 TSG101Q99816 390 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 DUSP9Q99956 384 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 TRAIPQ9BWF2 469 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 HIPK3Q9H422 1215 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
TRAF4-206ENST00000454852 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
TRAF4-206ENST00000454852 MAPK13O15264 365 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ERLIN2O94905 339 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 TIMP1P01033 207 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 CTSHP09668 335 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms