RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 PPP4CP60510 307 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 ZNF543Q08ER8 600 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 FOXR2Q6PJQ5 311 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 SPATA21Q7Z572 469 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 ZNF622Q969S3 477 aaKnown RBP eCLIP21.1■□□□□ 0.971e-8■□□□□ 9.9
LMBR1-213ENST00000454132 MRRFQ96E11 262 aaKnown RBP21.1■□□□□ 0.97
LMBR1-213ENST00000454132 NAP1L3Q99457 506 aaPredicted RBP21.1■□□□□ 0.97
LMBR1-213ENST00000454132 SLC5A4Q9NY91 659 aa21.1■□□□□ 0.97
LMBR1-213ENST00000454132 LDHCP07864 332 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 HYIQ5T013 277 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 TAOK1Q7L7X3 1001 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 TGS1Q96RS0 853 aaKnown RBP21.09■□□□□ 0.97
LMBR1-213ENST00000454132 PDHA1P08559 390 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 RPL13P26373 211 aaKnown RBP21.09■□□□□ 0.97
LMBR1-213ENST00000454132 BNIP1Q12981 228 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 RIPK1Q13546 671 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 TAF11Q15544 211 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 ASPRV1Q53RT3 343 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 PTF1AQ7RTS3 328 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 KAT5Q92993 513 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 PLCD4Q9BRC7 762 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 PCIF1Q9H4Z3 704 aa21.09■□□□□ 0.97
LMBR1-213ENST00000454132 TTC7AQ9ULT0 858 aaPredicted RBP21.09■□□□□ 0.97
LMBR1-213ENST00000454132 TISP43B9A030 160 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 CALCAP01258 141 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 BRAFP15056 766 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 HOXA13P31271 388 aaPredicted RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 MFSD14BQ5SR56 506 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 THEMIS2Q5TEJ8 643 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 EPM2AIP1Q7L775 607 aaPredicted RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 SRRM1Q8IYB3 904 aaKnown RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 PARD3BQ8TEW8 1205 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 SPOCK2Q92563 424 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 STK33Q9BYT3 514 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 INTS2Q9H0H0 1204 aaKnown RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 HOMER3Q9NSC5 361 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 CGB2Q6NT52 195 aa21.08■□□□□ 0.97
LMBR1-213ENST00000454132 ZNF483Q8TF39 744 aaPredicted RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 UBE2TQ9NPD8 197 aaPredicted RBP21.08■□□□□ 0.97
LMBR1-213ENST00000454132 ZBTB5O15062 677 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 ATP2A2P16615 1042 aaKnown RBP21.08■□□□□ 0.96
LMBR1-213ENST00000454132 STX2P32856 288 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 RHBDL3P58872 404 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 DLG4P78352 724 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 BIRC2Q13490 618 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 QRICH1Q2TAL8 776 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 GALNTL6Q49A17 601 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 HP1BP3Q5SSJ5 553 aaPredicted RBP21.08■□□□□ 0.96
LMBR1-213ENST00000454132 TPH2Q8IWU9 490 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 SYT2Q8N9I0 419 aaPredicted RBP21.08■□□□□ 0.96
LMBR1-213ENST00000454132 ASIC3Q9UHC3 531 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 INTUQ9ULD6 942 aa21.08■□□□□ 0.96
LMBR1-213ENST00000454132 NCANO14594 1321 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 FAM86B1E9PN63 330 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 EML1O00423 815 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 CLDN3O15551 220 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 SPOPO43791 374 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 FAM86B2P0C5J1 330 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 CETPP11597 493 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 TM4SF1P30408 202 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 SEL1L2Q5TEA6 688 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 DAB2IPQ5VWQ8 1189 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 KIAA0825Q8IV33 1275 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 ANKLE1Q8NAG6 615 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 METTL14Q9HCE5 456 aaKnown RBP21.07■□□□□ 0.96
LMBR1-213ENST00000454132 PCDHA3Q9Y5H8 950 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 OAS1P00973 400 aaKnown RBP21.07■□□□□ 0.96
LMBR1-213ENST00000454132 CCND1P24385 295 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 TARSP26639 723 aaKnown RBP21.07■□□□□ 0.96
LMBR1-213ENST00000454132 CHRNA3P32297 505 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 COILP38432 576 aaPredicted RBP21.07■□□□□ 0.96
LMBR1-213ENST00000454132 UBL4BQ8N7F7 174 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 ARMC2Q8NEN0 867 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 TBC1D22AQ8WUA7 517 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 SPIRE2Q8WWL2 714 aa21.07■□□□□ 0.96
LMBR1-213ENST00000454132 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 SPAG7O75391 227 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 RARGP13631 454 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 LACTBP83111 547 aaPredicted RBP21.06■□□□□ 0.96
LMBR1-213ENST00000454132 ATP11AP98196 1134 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 CALCOCO2Q13137 446 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 MIS18BP1Q6P0N0 1132 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 ZNF449Q6P9G9 518 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 RPUSD2Q8IZ73 545 aaKnown RBP21.06■□□□□ 0.96
LMBR1-213ENST00000454132 TBC1D16Q8TBP0 767 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 ZSWIM1Q9BR11 485 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 SMNDC1O75940 238 aaKnown RBP eCLIP21.06■□□□□ 0.96
LMBR1-213ENST00000454132 FAM13AO94988 1023 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 CHRNB2P17787 502 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 PSMC2P35998 433 aaKnown RBP21.06■□□□□ 0.96
LMBR1-213ENST00000454132 SPIRE1Q08AE8 756 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 CAPN12Q6ZSI9 719 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 UTP4Q969X6 686 aaKnown RBP21.06■□□□□ 0.96
LMBR1-213ENST00000454132 AGPAT1Q99943 283 aa21.06■□□□□ 0.96
LMBR1-213ENST00000454132 AAASQ9NRG9 546 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms