RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 TRIM55Q9BYV6 548 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 TSPYL2Q9H2G4 693 aaPredicted RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 NPHS2Q9NP85 383 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 FGFR1OP2Q9NVK5 253 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 M0QZ92 97 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 LSP1P33241 339 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 BTKQ06187 659 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 KYNUQ16719 465 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 SEC24DO94855 1032 aaPredicted RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 SKIP12755 728 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 SOX5P35711 763 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 ISLR2Q6UXK2 745 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 ILDR1Q86SU0 546 aaPredicted RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 EIF2AK1Q9BQI3 630 aaKnown RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 REEP2Q9BRK0 252 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 MIS12Q9H081 205 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 MYL3P08590 195 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 IL31Q6EBC2 164 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 CDR2LQ86X02 465 aaPredicted RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 SLC26A7Q8TE54 656 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 NSUN4Q96CB9 384 aaKnown RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 ADPGKQ9BRR6 497 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 TMEM117Q9H0C3 514 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 UBN1Q9NPG3 1134 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 EEF1B2P24534 225 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 SKA2Q8WVK7 121 aaPredicted RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 WDR11Q9BZH6 1224 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ZCWPW1Q9H0M4 648 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CFAP74Q9C0B2 1584 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 A0A087X0B3 334 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 A0A1W2PQC6 194 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 IGF2BP3O00425 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
RIF1-206ENST00000453091 PHEXP78562 749 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 SNRNP48Q6IEG0 339 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 COA1Q9GZY4 146 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ALKQ9UM73 1620 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 F5H6K3 240 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 NEMP1O14524 444 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 CCND2P30279 289 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 KLRC3Q07444 240 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 SEZ6Q53EL9 994 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 DACT3Q96B18 629 aaPredicted RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 BPIFB4P59827 614 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CUL3Q13618 768 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CAPRIN2Q6IMN6 1127 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 MAP7D3Q8IWC1 876 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ATG4AQ8WYN0 398 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 DAGLAQ9Y4D2 1042 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 GRID2IPA4D2P6 1211 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 LPXNO60711 386 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CAMTA2O94983 1202 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 MIS18BP1Q6P0N0 1132 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ADGRA1Q86SQ6 560 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 TRIML2Q8N7C3 387 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ALKBH8Q96BT7 664 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 CCDC17Q96LX7 622 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ANGPTL2Q9UKU9 493 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 ZCCHC11Q5TAX3 1644 aaKnown RBP8.26□□□□□ -1.09
RIF1-206ENST00000453091 PSMD14O00487 310 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 SLC37A4O43826 429 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 NPR1P16066 1061 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CORO7P57737 925 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 TNFAIP1Q13829 316 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 CCNYL1Q8N7R7 359 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 TBC1D16Q8TBP0 767 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 NSMCE1Q8WV22 266 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 NRKQ7Z2Y5 1582 aa8.26□□□□□ -1.09
RIF1-206ENST00000453091 TARSL2A2RTX5 802 aaKnown RBP8.25□□□□□ -1.09
RIF1-206ENST00000453091 M0QYV0 167 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 ARSEP51690 589 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 ART3Q13508 389 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 LRRC23Q53EV4 343 aaPredicted RBP8.25□□□□□ -1.09
RIF1-206ENST00000453091 JAMLQ86YT9 394 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 SLC17A8Q8NDX2 589 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 OR6B3Q8NGW1 331 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 ERP27Q96DN0 273 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 LXNQ9BS40 222 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 Q9H521 79 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 MRPL47Q9HD33 250 aaKnown RBP8.25□□□□□ -1.09
RIF1-206ENST00000453091 MYO3BQ8WXR4 1341 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 ZRANB2O95218 330 aaKnown RBP eCLIP8.25□□□□□ -1.095e-9■■■■■ 100.6
RIF1-206ENST00000453091 APOEP02649 317 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 ELF1P32519 619 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 HSD17B3P37058 310 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 CASP4P49662 377 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 LMNB2Q03252 620 aa8.25□□□□□ -1.09
RIF1-206ENST00000453091 P3H1Q32P28 736 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms