RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 RNF149Q8NC42 400 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 NRDE2Q9H7Z3 1164 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 ASAP2O43150 1006 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 SKIP12755 728 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 PPM1AP35813 382 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 NUBP1P53384 320 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 PTPN21Q16825 1174 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 AGMOQ6ZNB7 445 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 TMEM173Q86WV6 379 aaPredicted RBP18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 CDCA3Q99618 268 aaPredicted RBP18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 MTRQ99707 1265 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 MRPL9Q9BYD2 267 aaKnown RBP18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 ENTPD7Q9NQZ7 604 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 TBC1D13Q9NVG8 400 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 INPP5FQ9Y2H2 1132 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 PCDHB2Q9Y5E7 798 aa18.31■□□□□ 0.52
RPUSD3-209ENST00000451405 ZDBF2Q9HCK1 2354 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 POTEMA6NI47 508 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 B4GALT3O60512 393 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 SRGAP2BP0DMP2 458 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 MCM7P33993 719 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 ALDH7A1P49419 539 aaKnown RBP18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 NOMO2Q5JPE7 1267 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 LLGL2Q6P1M3 1020 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 TMEM184AQ6ZMB5 413 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 ZNF280BQ86YH2 543 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 MRPL43Q8N983 215 aaKnown RBP18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 ASAP3Q8TDY4 903 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 BCL7CQ8WUZ0 217 aaPredicted RBP18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 ANKEF1Q9NU02 776 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
RPUSD3-209ENST00000451405 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 GAS2O43903 313 aaKnown RBP18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 CXCL14O95715 111 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 GALTP07902 379 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 SPATA31C1P0DKV0 1188 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 ARL2P36404 184 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 RARRES1P49788 294 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 RAB27AP51159 221 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 SYCE2Q6PIF2 218 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 GLB1LQ6UWU2 654 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 PGBD4Q96DM1 585 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 C8orf76Q96K31 380 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 APOL5Q9BWW9 433 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 GBP3Q9H0R5 595 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 S1PR5Q9H228 398 aa18.29■□□□□ 0.52
RPUSD3-209ENST00000451405 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 GALR2O43603 387 aaPredicted RBP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 DDHD2O94830 711 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 TECP42680 631 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 PTENP60484 403 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 CAPSQ13938 189 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 SAFBQ15424 915 aaKnown RBP eCLIP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 ZNF174Q15697 407 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 ANKRD54Q6NXT1 300 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 ASCL5Q7RTU5 278 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 SMG8Q8ND04 991 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 SUSD6Q92537 303 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 LLPHQ9BRT6 129 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 EIF2AQ9BY44 585 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 RNF39Q9H2S5 420 aa18.28■□□□□ 0.52
RPUSD3-209ENST00000451405 PROB1E7EW31 1015 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 TSPAN1O60635 241 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 MED24O75448 989 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 DGAT1O75907 488 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 GLRA2P23416 452 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 SLC11A1P49279 550 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 MXD4Q14582 209 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 VPS52Q8N1B4 723 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 TMEM169Q96HH4 297 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 IGSF21Q96ID5 467 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 ZSCAN31Q96LW9 406 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
RPUSD3-209ENST00000451405 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 PDGFBP01127 241 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 XRCC6P12956 609 aaKnown RBP eCLIP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 SP100P23497 879 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 RNASELQ05823 741 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 POU5F1BQ06416 359 aa18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 AMHR2Q16671 573 aa18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
RPUSD3-209ENST00000451405 ERMP1Q7Z2K6 904 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms