RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 TBX20Q9UMR3 447 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 TISP43B9A030 160 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 MGEA5O60502 916 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 CXCL10P02778 98 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
RCL1-208ENST00000448872 HOXA11P31270 313 aaPredicted RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 EFNA5P52803 228 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 MORC3Q14149 939 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 MAPK6Q16659 721 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 RBM43Q6ZSC3 357 aaKnown RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 ST6GALNAC4Q9H4F1 302 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 RMND1Q9NWS8 449 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 H0YGN5 161 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 ACKR2O00590 384 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 GPR182O15218 404 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 ERLIN2O94905 339 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 STRN3Q13033 797 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 PSMD2Q13200 908 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 MAP4K3Q8IVH8 894 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 LINC01599Q8WXQ3 324 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 AGPAT5Q9NUQ2 364 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
RCL1-208ENST00000448872 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 ARID2Q68CP9 1835 aa13.03□□□□□ -0.32
RCL1-208ENST00000448872 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 RFC2P35250 354 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 PRCPP42785 496 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 FPGSQ05932 587 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
RCL1-208ENST00000448872 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 SLC39A4Q6P5W5 647 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 RTN4RL1Q86UN2 441 aaPredicted RBP13.02□□□□□ -0.33
RCL1-208ENST00000448872 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 ZBTB45Q96K62 511 aaPredicted RBP13.02□□□□□ -0.33
RCL1-208ENST00000448872 PDZD7Q9H5P4 517 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
RCL1-208ENST00000448872 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 SQORQ9Y6N5 450 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 CNTNAP2Q9UHC6 1331 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
RCL1-208ENST00000448872 H0YCG3 227 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 DSC3Q14574 896 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 DPCR1Q3MIW9 517 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 ATF7IP2Q5U623 682 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 MYOCDQ8IZQ8 938 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 SLC17A8Q8NDX2 589 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 SEPT8Q92599 483 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 KCNN1Q92952 543 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 BICD1Q96G01 975 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 HAPLN2Q9GZV7 340 aa13.01□□□□□ -0.33
RCL1-208ENST00000448872 MYH9P35579 1960 aaKnown RBP13.01□□□□□ -0.33
RCL1-208ENST00000448872 TNRC18O15417 2968 aaPredicted RBP13□□□□□ -0.33
RCL1-208ENST00000448872 A0A1B0GUA9 196 aa13□□□□□ -0.33
RCL1-208ENST00000448872 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ABLIM1O14639 778 aa13□□□□□ -0.33
RCL1-208ENST00000448872 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
RCL1-208ENST00000448872 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
RCL1-208ENST00000448872 TGFB1I1O43294 461 aa13□□□□□ -0.33
RCL1-208ENST00000448872 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
RCL1-208ENST00000448872 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.33
RCL1-208ENST00000448872 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
RCL1-208ENST00000448872 UBXN11Q5T124 520 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ZNF365Q70YC5 407 aa13□□□□□ -0.33
RCL1-208ENST00000448872 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ZBTB33Q86T24 672 aa13□□□□□ -0.33
RCL1-208ENST00000448872 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ADSSL1Q8N142 457 aa13□□□□□ -0.33
RCL1-208ENST00000448872 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
RCL1-208ENST00000448872 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ADAM2Q99965 735 aa13□□□□□ -0.33
RCL1-208ENST00000448872 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
RCL1-208ENST00000448872 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
RCL1-208ENST00000448872 PTPRHQ9HD43 1115 aa13□□□□□ -0.33
RCL1-208ENST00000448872 ANKFY1Q9P2R3 1169 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms