RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ECHDC2Q86YB7 292 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 ABI1Q8IZP0 508 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 MYCT1Q8N699 235 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 CPB2Q96IY4 423 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 REEP2Q9BRK0 252 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 PARVGQ9HBI0 331 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 FAM105AQ9NUU6 356 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 CHMP5Q9NZZ3 219 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 GOLGA6L4A6NEF3 574 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 H0YCG3 227 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 SLC16A4O15374 487 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 POLR2DO15514 142 aaKnown RBP15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 DGKIO75912 1065 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 EOMESO95936 686 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 CMA1P23946 247 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 HOXA11P31270 313 aaPredicted RBP15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 STRN3Q13033 797 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 PRPF4BQ13523 1007 aaKnown RBP15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 GIT2Q14161 759 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 BTG3Q14201 252 aaPredicted RBP15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 FAM187BQ17R55 369 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 CEP57L1Q8IYX8 460 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 FIBCD1Q8N539 461 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 SPIRE2Q8WWL2 714 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 DDX12PQ92771 950 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 TRAIPQ9BWF2 469 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 FZD8Q9H461 694 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 GDPD2Q9HCC8 539 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 KCNH3Q9ULD8 1083 aa15.45■□□□□ 0.06
GTF3C3-206ENST00000448539 ADGRA3Q8IWK6 1321 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 TBKBP1A7MCY6 615 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 ACKR2O00590 384 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 B4GALT5O43286 388 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 ARF4P18085 180 aaPredicted RBP15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 AMHR2Q16671 573 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 HACE1Q8IYU2 909 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 MYLIPQ8WY64 445 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 TNMDQ9H2S6 317 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 TMEM134Q9H6X4 195 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 ARHGAP28Q9P2N2 729 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
GTF3C3-206ENST00000448539 A0A1B0GVL5 298 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 LINC01553A4QN01 128 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 MYMKA6NI61 221 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 N4BP3O15049 544 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 ZNF623O75123 536 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 FGFR1P11362 822 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 IDEP14735 1019 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 PFKFB1P16118 471 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 TAP1Q03518 808 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 E2F4Q16254 413 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 PAN2Q504Q3 1202 aaKnown RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 SPOUT1Q5T280 376 aaKnown RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 SLC27A1Q6PCB7 646 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 APBB1IPQ7Z5R6 666 aaPredicted RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 CMTR2Q8IYT2 770 aaKnown RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 CRIPAKQ8N1N5 446 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 ZNF689Q96CS4 500 aaPredicted RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 ADPGKQ9BRR6 497 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 CCDC113Q9H0I3 377 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 TTC3P53804 2025 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 CNTNAP2Q9UHC6 1331 aa15.43■□□□□ 0.06
GTF3C3-206ENST00000448539 A0A1B0GUA9 196 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 A0A1W2PQ27 194 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 A0A1W2PQ64 194 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 A0A1W2PQD8 194 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 K7ENM7 598 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 TRAK2O60296 914 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 GAP43P17677 238 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 SCP2P22307 547 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 ABCD1P33897 745 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 ZNF131P52739 623 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 UBXN11Q5T124 520 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 ZNF598Q86UK7 904 aaKnown RBP15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 FSIP1Q8NA03 581 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 TMEM161BQ8NDZ6 487 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 ARNTL2Q8WYA1 636 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 MRPS27Q92552 414 aaKnown RBP15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 STAMQ92783 540 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 SAMD11Q96NU1 681 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 MRPL4Q9BYD3 311 aaKnown RBP15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 TMEM117Q9H0C3 514 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 CERS4Q9HA82 394 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 KBTBD4Q9NVX7 518 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms