RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 PODXLO00592 558 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 ACADSP16219 412 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 ATP5DP30049 168 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 DRG2P55039 364 aaKnown RBP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 NPEPPSP55786 919 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 ZNF444Q8N0Y2 327 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 TAS2R14Q9NYV8 317 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 PCDHB13Q9Y5F0 798 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 TCRBV7S2A1N4TA0A589 114 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 VCAM1P19320 739 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 CASP5P51878 434 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 KYNUQ16719 465 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 TNFAIP8L3Q5GJ75 292 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 RBBP8NLQ8NC74 664 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 ROPN1BQ9BZX4 212 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 ROPN1Q9HAT0 212 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 CTTNBP2NLQ9P2B4 639 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 E7ENQ6 273 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 KCNA3P22001 575 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 FOXN2P32314 431 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 TRIP13Q15645 432 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 CYP4X1Q8N118 509 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 COA7Q96BR5 231 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 DIS3Q9Y2L1 958 aaKnown RBP17.2■□□□□ 0.34
CNOT3-204ENST00000447684 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
CNOT3-204ENST00000447684 ABLIM1O14639 778 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 CLIC2O15247 247 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 PRDX5P30044 214 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-204ENST00000447684 SERPINB4P48594 390 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 VPS41P49754 854 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 POLGP54098 1239 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-204ENST00000447684 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ZFAND2BQ8WV99 257 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 MAGEB18Q96M61 343 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 NIP7Q9Y221 180 aaKnown RBP eCLIP17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ITGB4P16144 1822 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ATP9AO75110 1047 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 SPAG7O75391 227 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 TAC1P20366 129 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 CASP4P49662 377 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ORC2Q13416 577 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-204ENST00000447684 TMEM119Q4V9L6 283 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 SEL1L2Q5TEA6 688 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 CCNJLQ8IV13 435 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 ZDHHC14Q8IZN3 488 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 UBL4BQ8N7F7 174 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 DTX3LQ8TDB6 740 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 BORCS6Q96GS4 357 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 SERPINB12Q96P63 405 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 SLCO1B3Q9NPD5 702 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 COG5Q9UP83 839 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
CNOT3-204ENST00000447684 POTEB3A0JP26 581 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 POTECB2RU33 542 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 THAP12O43422 761 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 AKAP3O75969 853 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 TNFAIP3P21580 790 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 PPATQ06203 517 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 STRN3Q13033 797 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
CNOT3-204ENST00000447684 MESDQ14696 234 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 ARHGAP44Q17R89 818 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 RBM41Q96IZ5 413 aaKnown RBP17.18■□□□□ 0.34
CNOT3-204ENST00000447684 FAM210AQ96ND0 272 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 INTUQ9ULD6 942 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-204ENST00000447684 SMAPO00193 183 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 MAPK13O15264 365 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 ATP5HO75947 161 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 TMEM253P0C7T8 217 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 LMNB1P20700 586 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 CHKAP35790 457 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 FOXB2Q5VYV0 432 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 OR52E8Q6IFG1 317 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 DPY19L2P1Q6NXN4 242 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 PALB2Q86YC2 1186 aa17.18■□□□□ 0.34
CNOT3-204ENST00000447684 FAM81AQ8TBF8 368 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms