RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 MTFR1Q15390 333 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 TAPT1Q6NXT6 567 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 CCDC60Q8IWA6 550 aaPredicted RBP6.46□□□□□ -1.38
PROM1-201ENST00000447510 GRAMD1CQ8IYS0 662 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 SH2D3CQ8N5H7 860 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 CEP120Q8N960 986 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 LENG9Q96B70 501 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 POLR3CQ9BUI4 534 aaPredicted RBP6.46□□□□□ -1.38
PROM1-201ENST00000447510 SENP6Q9GZR1 1112 aaPredicted RBP6.46□□□□□ -1.38
PROM1-201ENST00000447510 CUEDC2Q9H467 287 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 PPANQ9NQ55 473 aaKnown RBP6.46□□□□□ -1.38
PROM1-201ENST00000447510 HDAC6Q9UBN7 1215 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 DACH1Q9UI36 760 aa6.46□□□□□ -1.38
PROM1-201ENST00000447510 G3BP2Q9UN86 482 aaKnown RBP6.46□□□□□ -1.38
PROM1-201ENST00000447510 GREB1LQ9C091 1923 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 STX10O60499 249 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 RGS20O76081 388 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MMP3P08254 477 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ZNF865P0CJ78 1059 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 SRGAP2CP0DJJ0 459 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 PSEN2P49810 448 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 SNCBQ16143 134 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 GPIHBP1Q8IV16 184 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 FMR1NBQ8N0W7 255 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 PPTC7Q8NI37 304 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 THOC1Q96FV9 657 aaKnown RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 RSRC1Q96IZ7 334 aaKnown RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 GPR20Q99678 358 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 ATP6V0A4Q9HBG4 840 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 LARSQ9P2J5 1176 aaKnown RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 ASTN1O14525 1302 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 SFI1A8K8P3 1242 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 EYA4O95677 639 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 SLC26A2P50443 739 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ARHGAP1Q07960 439 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MFSD10Q14728 455 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 KCNA10Q16322 511 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ZBTB8OSQ8IWT0 167 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MCPH1Q8NEM0 835 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 NLRP7Q8WX94 980 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 RAD54LQ92698 747 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 NLRP4Q96MN2 994 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 YIPF3Q9GZM5 350 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MAGEF1Q9HAY2 307 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 SETD4Q9NVD3 440 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MYO6Q9UM54 1294 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 COL4A3BPQ9Y5P4 624 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 C17orf102A2RUQ5 167 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 E7EVH7 732 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 BUB1BO60566 1050 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 SLITRK3O94933 977 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ASGR1P07306 291 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 CYP2C9P11712 490 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 CYBAP13498 195 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 INSRRP14616 1297 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 DMP1Q13316 513 aaPredicted RBP6.45□□□□□ -1.38
PROM1-201ENST00000447510 ODF2Q5BJF6 829 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ODR4Q5SWX8 454 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 TMEM63BQ5T3F8 832 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 FAM178BQ8IXR5 827 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 C4orf32Q8N8J7 132 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ARMC2Q8NEN0 867 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 ATP8B4Q8TF62 1192 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MBOAT7Q96N66 472 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 MTRQ99707 1265 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 PANK4Q9NVE7 773 aa6.45□□□□□ -1.38
PROM1-201ENST00000447510 TMEM150BA6NC51 233 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 RRN3P2A6NIE6 340 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 INO80B-WBP1J3KQ70 363 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 GTPBP6O43824 516 aaPredicted RBP6.44□□□□□ -1.38
PROM1-201ENST00000447510 GCNT3O95395 438 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 SYF2O95926 243 aaKnown RBP6.44□□□□□ -1.38
PROM1-201ENST00000447510 KCNJ6P48051 423 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 PSMC6P62333 389 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 STRN3Q13033 797 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 SNX1Q13596 522 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 TFDP1Q14186 410 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 KIAA1328Q86T90 577 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 LRRC71Q8N4P6 559 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 ENGASEQ8NFI3 743 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
PROM1-201ENST00000447510 TCP11Q8WWU5 503 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 PSPC1Q8WXF1 523 aaKnown RBP6.44□□□□□ -1.38
PROM1-201ENST00000447510 USP6NLQ92738 828 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 TMEM143Q96AN5 459 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 FGD4Q96M96 766 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 TSG101Q99816 390 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 INO80BQ9C086 356 aaPredicted RBP6.44□□□□□ -1.38
PROM1-201ENST00000447510 KCND1Q9NSA2 647 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 ANKEF1Q9NU02 776 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 VAV3Q9UKW4 847 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 HPCAL4Q9UM19 191 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 MAPK8IP1Q9UQF2 711 aa6.44□□□□□ -1.38
PROM1-201ENST00000447510 ATP11BQ9Y2G3 1177 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms