RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 PPP4R3AQ6IN85 833 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 ERAP2Q6P179 960 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 SPATA31D4Q6ZUB0 917 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 CYP4V2Q6ZWL3 525 aaPredicted RBP9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 CCDC63Q8NA47 563 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 NLRP7Q8WX94 980 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 PBXIP1Q96AQ6 731 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 HDAC11Q96DB2 347 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 TMA16Q96EY4 203 aaKnown RBP9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 CHAMP1Q96JM3 812 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 CCDC77Q9BR77 488 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 RIOK1Q9BRS2 568 aaKnown RBP9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 TBC1D22BQ9NU19 505 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 SOX13Q9UN79 622 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 ARHGEF40Q8TER5 1519 aa9.25□□□□□ -0.93
MCF2L2-203ENST00000447025 ANO9A1A5B4 782 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 VPS37CA5D8V6 355 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 PPIP5K2O43314 1243 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 SNX4O95219 450 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 DDX58O95786 925 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 FAM107AO95990 144 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ATF6P18850 670 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CRABP2P29373 138 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 SLC26A3P40879 764 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 EMP3P54852 163 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 PPP2R2BQ00005 443 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 NONOQ15233 471 aaKnown RBP eCLIP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ALFQ53S48 1182 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ANO1Q5XXA6 986 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 WDR93Q6P2C0 686 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 EHBP1Q8NDI1 1231 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 FLAD1Q8NFF5 587 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 RMDN1Q96DB5 314 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 TSNARE1Q96NA8 513 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 TESK2Q96S53 571 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 PNKPQ96T60 521 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 NTPCRQ9BSD7 190 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 RBM42Q9BTD8 480 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 DENND2DQ9H6A0 471 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ACAD9Q9H845 621 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 KCNMB3Q9NPA1 279 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ANO2Q9NQ90 1003 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 IL37Q9NZH6 218 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 LUZP4Q9P127 313 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 IMPACTQ9P2X3 320 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 MBD2Q9UBB5 411 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 KCNN3Q9UGI6 736 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 DNM3Q9UQ16 869 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 USP20Q9Y2K6 914 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 VWA3AA6NCI4 1184 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 GOLGA8BA8MQT2 603 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 A8MX80 341 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 STMND1H3BQB6 276 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 GOLGA8RI6L899 631 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 TK2O00142 265 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 RHOBTB3O94955 611 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 KRT6AP02538 564 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 KRT6BP04259 564 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ECE1P42892 770 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ETV1P50549 477 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CHMP4BP1P59074 171 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 DSC3Q14574 896 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 RFTN1Q14699 578 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 LEXMQ3ZCV2 418 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ZBTB41Q5SVQ8 909 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CCDC102BQ68D86 513 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 BORAQ6PGQ7 559 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 USP51Q70EK9 711 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 GPIHBP1Q8IV16 184 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 NKAIN4Q8IVV8 208 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 TBC1D21Q8IYX1 336 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 RTKN2Q8IZC4 609 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 OR6C4Q8NGE1 309 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CALML6Q8TD86 181 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CCDC106Q9BWC9 280 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 TIMMDC1Q9NPL8 285 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 C9orf78Q9NZ63 289 aaPredicted RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 FBXO10Q9UK96 956 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 SLC8A2Q9UPR5 921 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
MCF2L2-203ENST00000447025 ZSCAN5BA6NJL1 495 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 B8ZZF3 427 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 H3BUI4 141 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 GREM1O60565 184 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 KLHL2O95198 593 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 ITGB3P05106 788 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 RHOXF2BP0C7M4 288 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 FDX1P10109 184 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 VAMP1P23763 118 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 SLC1A1P43005 524 aa9.23□□□□□ -0.93
MCF2L2-203ENST00000447025 KRT6CP48668 564 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms