RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PLA2G4FQ68DD2 849 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 MOXD1Q6UVY6 613 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 AGMOQ6ZNB7 445 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 MRPL10Q7Z7H8 261 aaKnown RBP27.29■■□□□ 1.96
PMS1-214ENST00000446877 BLIDQ8IZY5 108 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 RTP3Q9BQQ7 232 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 SLKQ9H2G2 1235 aaPredicted RBP27.29■■□□□ 1.96
PMS1-214ENST00000446877 KCNK12Q9HB15 430 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 IFT122Q9HBG6 1241 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 DDX25Q9UHL0 483 aaKnown RBP27.29■■□□□ 1.96
PMS1-214ENST00000446877 DPP7Q9UHL4 492 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 SSX2IPQ9Y2D8 614 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 SPTBN4Q9H254 2564 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 SRGAP2CP0DJJ0 459 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 QARSP47897 775 aaKnown RBP27.28■■□□□ 1.96
PMS1-214ENST00000446877 CWF19L1Q69YN2 538 aaKnown RBP27.28■■□□□ 1.96
PMS1-214ENST00000446877 SRGAP1Q7Z6B7 1085 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 ETNPPLQ8TBG4 499 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 FEZF2Q8TBJ5 459 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 IGSF9Q9P2J2 1179 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 DUSP12Q9UNI6 340 aa27.28■■□□□ 1.96
PMS1-214ENST00000446877 C2CD2LO14523 706 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 NRP1O14786 923 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 CPLX1O14810 134 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 B4GALT3O60512 393 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 LILRB3O75022 631 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 POMCP01189 267 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 URODP06132 367 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 AK2P54819 239 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 CENPQQ7L2Z9 268 aaPredicted RBP27.27■■□□□ 1.96
PMS1-214ENST00000446877 SIX5Q8N196 739 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 PRPF31Q8WWY3 499 aaKnown RBP27.27■■□□□ 1.96
PMS1-214ENST00000446877 PSPC1Q8WXF1 523 aaKnown RBP27.27■■□□□ 1.96
PMS1-214ENST00000446877 CEP170P1Q96L14 293 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 MBOAT7Q96N66 472 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 UBN1Q9NPG3 1134 aa27.27■■□□□ 1.96
PMS1-214ENST00000446877 STK25O00506 426 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 PI15O43692 258 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 NPR3P17342 541 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 AFF1P51825 1210 aaKnown RBP27.26■■□□□ 1.95
PMS1-214ENST00000446877 NPEPPSP55786 919 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 EVCP57679 992 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 NONOQ15233 471 aaKnown RBP eCLIP27.26■■□□□ 1.95
PMS1-214ENST00000446877 GALNT17Q6IS24 598 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 PPME1Q9Y570 386 aa27.26■■□□□ 1.95
PMS1-214ENST00000446877 FAM186AA6NE01 2351 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 DEXIO95424 95 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 SOD2P04179 222 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 ADH1AP07327 375 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 CCDC105Q8IYK2 499 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 ADSSL1Q8N142 457 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 CNNM3Q8NE01 707 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 CMASQ8NFW8 434 aaPredicted RBP27.25■■□□□ 1.95
PMS1-214ENST00000446877 STAMQ92783 540 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 TMEM143Q96AN5 459 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 RPS6KC1Q96S38 1066 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 MAN1C1Q9NR34 630 aa27.25■■□□□ 1.95
PMS1-214ENST00000446877 EML1O00423 815 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 RFX1P22670 979 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 HOXA11P31270 313 aaPredicted RBP27.24■■□□□ 1.95
PMS1-214ENST00000446877 GBP2P32456 591 aaPredicted RBP27.24■■□□□ 1.95
PMS1-214ENST00000446877 RFC5P40937 340 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 LAMTOR4Q0VGL1 99 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 CYP26C1Q6V0L0 522 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 DTWD2Q8NBA8 298 aa27.24■■□□□ 1.95
PMS1-214ENST00000446877 PRG3Q9Y2Y8 225 aaPredicted RBP27.24■■□□□ 1.95
PMS1-214ENST00000446877 CCDC195A0A1B0GUA6 201 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 NR1I2O75469 434 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 P4HBP07237 508 aaKnown RBP27.23■■□□□ 1.95
PMS1-214ENST00000446877 ITGA4P13612 1032 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 NCLP19338 710 aaKnown RBP27.23■■□□□ 1.95
PMS1-214ENST00000446877 OR1G1P47890 313 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 NCBP1Q09161 790 aaKnown RBP27.23■■□□□ 1.95
PMS1-214ENST00000446877 PPP2R5CQ13362 524 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 ANGPT1Q15389 498 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 INF2Q27J81 1249 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 UBXN11Q5T124 520 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 CPLX2Q6PUV4 134 aaKnown RBP27.23■■□□□ 1.95
PMS1-214ENST00000446877 KRT25Q7Z3Z0 450 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 FAM177A1Q8N128 213 aaPredicted RBP27.23■■□□□ 1.95
PMS1-214ENST00000446877 DAGLBQ8NCG7 672 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 TCP11Q8WWU5 503 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 FAM20AQ96MK3 541 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 MINDY3Q9H8M7 445 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 PLXNA3P51805 1871 aa27.23■■□□□ 1.95
PMS1-214ENST00000446877 M0R2N6 131 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 ASAP2O43150 1006 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 MARCH6O60337 910 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 ERLIN2O94905 339 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 GLUD1P00367 558 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 OTUD6AQ7L8S5 288 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 ZNF579Q8NAF0 562 aaKnown RBP27.22■■□□□ 1.95
PMS1-214ENST00000446877 HERC2P3Q9BVR0 1158 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 DHX33Q9H6R0 707 aaKnown RBP27.22■■□□□ 1.95
PMS1-214ENST00000446877 WDR6Q9NNW5 1121 aaKnown RBP27.22■■□□□ 1.95
PMS1-214ENST00000446877 WNT16Q9UBV4 365 aa27.22■■□□□ 1.95
PMS1-214ENST00000446877 WDR87Q6ZQQ6 2873 aa27.21■■□□□ 1.95
PMS1-214ENST00000446877 TEX28O15482 410 aa27.21■■□□□ 1.95
PMS1-214ENST00000446877 GAS2O43903 313 aaKnown RBP27.21■■□□□ 1.95
PMS1-214ENST00000446877 GLUD2P49448 558 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms