RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PEX3P56589 373 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 MCM6Q14566 821 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 PPP2R5AQ15172 486 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 NOTUMQ6P988 496 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 LINC00301Q8NCQ3 95 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
HDAC4-204ENST00000446876 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 C2orf40Q9H1Z8 148 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
HDAC4-204ENST00000446876 INPP5FQ9Y2H2 1132 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 RWDD3Q9Y3V2 267 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 REV3LO60673 3130 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 MYO7AQ13402 2215 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 CCDC169A6NNP5 214 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 SLC26A4O43511 780 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 ZNF623O75123 536 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 NPTXRO95502 500 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PRKCBP05771 671 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 SKIP12755 728 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 POU3F3P20264 500 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-204ENST00000446876 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 AXLP30530 894 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PBX3P40426 434 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 NPTX2P47972 431 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDAC4-204ENST00000446876 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 AGMOQ6ZNB7 445 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 LRRC43Q8N309 656 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 KRI1Q8N9T8 703 aaKnown RBP16.38■□□□□ 0.21
HDAC4-204ENST00000446876 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 RAD54LQ92698 747 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 C11orf84Q9BUA3 381 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-204ENST00000446876 APOL6Q9BWW8 343 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 FZD8Q9H461 694 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-204ENST00000446876 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 HES2Q9Y543 173 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 IPPQ9Y573 584 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
HDAC4-204ENST00000446876 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 SPTLC2O15270 562 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 ITGB1P05556 798 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 RB1P06400 928 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 AFF1P51825 1210 aaKnown RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 MAPK6Q16659 721 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 TMEM132AQ24JP5 1023 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 COLGALT1Q8NBJ5 622 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 CCDC51Q96ER9 411 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 DRC1Q96MC2 740 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 PLVAPQ9BX97 442 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
HDAC4-204ENST00000446876 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 MORC2Q9Y6X9 1032 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 TDRD15B5MCY1 1934 aaKnown RBP16.37■□□□□ 0.21
HDAC4-204ENST00000446876 A0A087X0B3 334 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 SLC16A4O15374 487 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 OFD1O75665 1012 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 BRD1O95696 1058 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 DNAJB1P25685 340 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 DNM1Q05193 864 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PRPF4BQ13523 1007 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 FAM187BQ17R55 369 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 EEF1DP3Q658K8 133 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 LARP4BQ92615 738 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PGBD4Q96DM1 585 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 MRPL38Q96DV4 380 aaKnown RBP16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 TIPINQ9BVW5 301 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PANK2Q9BZ23 570 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PDZD7Q9H5P4 517 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 KMT5AQ9NQR1 393 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 TCHHQ07283 1943 aa16.36■□□□□ 0.21
HDAC4-204ENST00000446876 A0A1B0GUA9 196 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 ACKR2O00590 384 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 B4GALT3O60512 393 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 YEATS4O95619 227 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 ITGA4P13612 1032 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 LAG3P18627 525 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 TXLNAP40222 546 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 CAMK1Q14012 370 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 BECN1Q14457 450 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
HDAC4-204ENST00000446876 PTPROQ16827 1216 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 NOMO2Q5JPE7 1267 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms