RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TBC1D13Q9NVG8 400 aa20.87■□□□□ 0.93
ATPAF2-201ENST00000444058 CLDND1Q9NY35 253 aa20.87■□□□□ 0.93
ATPAF2-201ENST00000444058 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
ATPAF2-201ENST00000444058 A0A1B0GUA9 196 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 FSCN2O14926 492 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 ADAM15Q13444 863 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 PPP2R5AQ15172 486 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 AGMOQ6ZNB7 445 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 SLC39A11Q8N1S5 342 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 EFHBQ8N7U6 833 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 MICAL1Q8TDZ2 1067 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 CSRNP2Q9H175 543 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 C2orf40Q9H1Z8 148 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 NGRNQ9NPE2 291 aaKnown RBP20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 DDX19AQ9NUU7 478 aaKnown RBP20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 DNM3Q9UQ16 869 aa20.86■□□□□ 0.93
ATPAF2-201ENST00000444058 MUC3AQ02505 3323 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 ATG2AQ2TAZ0 1938 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 LRRIQ4A6NIV6 560 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 MEIS3P2A8K0S8 358 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 INPPL1O15357 1258 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 ARF4P18085 180 aaPredicted RBP20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 NAMPTP43490 491 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 BCAR1P56945 870 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 ERVFC1P60507 584 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 FAM187BQ17R55 369 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 MAEAQ7L5Y9 396 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 ZBTB8OSQ8IWT0 167 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 SMG8Q8ND04 991 aaKnown RBP20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 URGCPQ8TCY9 931 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 KIFAP3Q92845 792 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 INTS4Q96HW7 963 aaKnown RBP20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 CDCA3Q99618 268 aaPredicted RBP20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 FZD8Q9H461 694 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 PRMT7Q9NVM4 692 aaPredicted RBP20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 FAM50BQ9Y247 325 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 IPPQ9Y573 584 aa20.85■□□□□ 0.93
ATPAF2-201ENST00000444058 PLXNA4Q9HCM2 1894 aa20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 GRXCR2A6NFK2 248 aa20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 H3BQ06 376 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 EYA4O95677 639 aa20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 BMP15O95972 392 aa20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 HYIQ5T013 277 aa20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 PTCRAQ6ISU1 281 aaPredicted RBP20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 MMTAG2Q9BU76 263 aaKnown RBP20.84■□□□□ 0.93
ATPAF2-201ENST00000444058 BDP1A6H8Y1 2624 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 ITGA4P13612 1032 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 PBX3P40426 434 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 RNASELQ05823 741 aaKnown RBP20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 LONRF3Q496Y0 759 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 SLC27A1Q6PCB7 646 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 EP400NLQ6ZTU2 488 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 ADGRD2Q7Z7M1 963 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 HACE1Q8IYU2 909 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 TMEM169Q96HH4 297 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 CPB2Q96IY4 423 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 AK8Q96MA6 479 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 TCF25Q9BQ70 676 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 EIF2AQ9BY44 585 aaKnown RBP20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 NT5C3AQ9H0P0 336 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 IGFLR1Q9H665 355 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 NRDE2Q9H7Z3 1164 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 TLE6Q9H808 572 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 STK39Q9UEW8 545 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 INPP5FQ9Y2H2 1132 aa20.83■□□□□ 0.93
ATPAF2-201ENST00000444058 ZMYM2Q9UBW7 1377 aa20.83■□□□□ 0.92
ATPAF2-201ENST00000444058 PP2D1A8MPX8 630 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 B4GALT5O43286 388 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 SLC26A4O43511 780 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 ZC3H11AO75152 810 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 CSPG5O95196 566 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 GALTP07902 379 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 GTF2F1P35269 517 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 NRIP1P48552 1158 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 EFNA5P52803 228 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 BMS1Q14692 1282 aaKnown RBP20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 MAPK6Q16659 721 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 BSNDQ8WZ55 320 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 IFT74Q96LB3 600 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 NECAB3Q96P71 396 aaPredicted RBP20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 TMEM175Q9BSA9 504 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 TRIM6Q9C030 488 aaPredicted RBP20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 GIT1Q9Y2X7 761 aa20.82■□□□□ 0.92
ATPAF2-201ENST00000444058 TCF20Q9UGU0 1960 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 VWA3AA6NCI4 1184 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 E9PMD0 336 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 ACKR2O00590 384 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 TBX10O75333 385 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 CDC25AP30304 524 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 DLX2Q07687 328 aaPredicted RBP20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 DUSP6Q16828 381 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 DDX53Q86TM3 631 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 FAM178BQ8IXR5 827 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 DEPTORQ8TB45 409 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 IGSF21Q96ID5 467 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 TIPINQ9BVW5 301 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 CCDC113Q9H0I3 377 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms