RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 STK24Q9Y6E0 443 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 NT5C1B-RDH14C9J2C7 533 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 PER2O15055 1255 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 TBX10O75333 385 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 OFD1O75665 1012 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CA8P35219 290 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 MBTD1Q05BQ5 628 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 BMS1Q14692 1282 aaKnown RBP22.27■■□□□ 1.16
LRCH3-208ENST00000443727 PADI6Q6TGC4 694 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 TMC7Q7Z402 723 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 FAM178BQ8IXR5 827 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 SLC39A11Q8N1S5 342 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CNNM3Q8NE01 707 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CCDC51Q96ER9 411 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 TMEM169Q96HH4 297 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CPB2Q96IY4 423 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 TRIM6Q9C030 488 aaPredicted RBP22.27■■□□□ 1.16
LRCH3-208ENST00000443727 RSAD1Q9HA92 442 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 NGRNQ9NPE2 291 aaKnown RBP22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CD207Q9UJ71 328 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.27■■□□□ 1.16
LRCH3-208ENST00000443727 CNTNAP2Q9UHC6 1331 aa22.27■■□□□ 1.16
LRCH3-208ENST00000443727 PLXNA4Q9HCM2 1894 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 ATG2AQ2TAZ0 1938 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 FSD2A1L4K1 749 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 CARNS1A5YM72 827 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 LAD1O00515 517 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 FSCN2O14926 492 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 ITGA4P13612 1032 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 MUTP22033 750 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 PDIA5Q14554 519 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 RILPL1Q5EBL4 403 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 UBXN11Q5T124 520 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 MRPL10Q7Z7H8 261 aaKnown RBP22.26■■□□□ 1.15
LRCH3-208ENST00000443727 IFNLR1Q8IU57 520 aaPredicted RBP22.26■■□□□ 1.15
LRCH3-208ENST00000443727 FAM193BQ96PV7 902 aaPredicted RBP22.26■■□□□ 1.15
LRCH3-208ENST00000443727 CDCA3Q99618 268 aaPredicted RBP22.26■■□□□ 1.15
LRCH3-208ENST00000443727 NFKBIZQ9BYH8 718 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 KIAA1024Q9UPX6 916 aa22.26■■□□□ 1.15
LRCH3-208ENST00000443727 SMAD4Q13485 552 aaKnown RBP22.25■■□□□ 1.15
LRCH3-208ENST00000443727 DTHD1Q6ZMT9 781 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 AGMOQ6ZNB7 445 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 ZBTB8OSQ8IWT0 167 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 HACE1Q8IYU2 909 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 GJD3Q8N144 294 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 SNX29Q8TEQ0 813 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 UBN1Q9NPG3 1134 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 KANSL3Q9P2N6 904 aa22.25■■□□□ 1.15
LRCH3-208ENST00000443727 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 SRGAP2BP0DMP2 458 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 CYP11B2P19099 503 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
LRCH3-208ENST00000443727 SMC1AQ14683 1233 aaKnown RBP22.24■■□□□ 1.15
LRCH3-208ENST00000443727 DUSP6Q16828 381 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 KRT79Q5XKE5 535 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 TMEM87AQ8NBN3 555 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 EIF2AQ9BY44 585 aaKnown RBP22.24■■□□□ 1.15
LRCH3-208ENST00000443727 CSRNP2Q9H175 543 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 BHMT2Q9H2M3 363 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 NRDE2Q9H7Z3 1164 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 DDX19AQ9NUU7 478 aaKnown RBP22.24■■□□□ 1.15
LRCH3-208ENST00000443727 BARX2Q9UMQ3 279 aaPredicted RBP22.24■■□□□ 1.15
LRCH3-208ENST00000443727 IPPQ9Y573 584 aa22.24■■□□□ 1.15
LRCH3-208ENST00000443727 HIDE1A8MVS5 230 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 B4GALT5O43286 388 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 ARF4P18085 180 aaPredicted RBP22.23■■□□□ 1.15
LRCH3-208ENST00000443727 PRPHP41219 470 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 TMEM132AQ24JP5 1023 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 LARP1BQ659C4 914 aaKnown RBP22.23■■□□□ 1.15
LRCH3-208ENST00000443727 IGSF22Q8N9C0 903 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 SMG8Q8ND04 991 aaKnown RBP22.23■■□□□ 1.15
LRCH3-208ENST00000443727 APOL6Q9BWW8 343 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 C2orf40Q9H1Z8 148 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.23■■□□□ 1.15
LRCH3-208ENST00000443727 CLEC1BQ9P126 229 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 PRKAG3Q9UGI9 489 aa22.23■■□□□ 1.15
LRCH3-208ENST00000443727 MBTPS2O43462 519 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 POMCP01189 267 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 GALTP07902 379 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 PPP2R5AQ15172 486 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 SMAD2Q15796 467 aaKnown RBP22.22■■□□□ 1.15
LRCH3-208ENST00000443727 ECM1Q16610 540 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 AMHR2Q16671 573 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 ZNF280BQ86YH2 543 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 VPS52Q8N1B4 723 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 DEPTORQ8TB45 409 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 IGSF21Q96ID5 467 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 CD320Q9NPF0 282 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 PRMT7Q9NVM4 692 aaPredicted RBP22.22■■□□□ 1.15
LRCH3-208ENST00000443727 DNAJB4Q9UDY4 337 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 DNM3Q9UQ16 869 aa22.22■■□□□ 1.15
LRCH3-208ENST00000443727 CXCL14O95715 111 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 GLP2RO95838 553 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 LIG1P18858 919 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 SLC11A1P49279 550 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 ZRSR1Q15695 479 aaKnown RBP22.21■■□□□ 1.15
LRCH3-208ENST00000443727 LLGL2Q6P1M3 1020 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 SLC27A1Q6PCB7 646 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 MRPL43Q8N983 215 aaKnown RBP22.21■■□□□ 1.15
LRCH3-208ENST00000443727 MSLNLQ96KJ4 702 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms