RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 CCDC113Q9H0I3 377 aa12.4□□□□□ -0.42
PRKD3-203ENST00000443187 LMAN2LQ9H0V9 348 aa12.4□□□□□ -0.42
PRKD3-203ENST00000443187 FZD8Q9H461 694 aa12.4□□□□□ -0.42
PRKD3-203ENST00000443187 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
PRKD3-203ENST00000443187 UBE2ZQ9H832 354 aaPredicted RBP12.4□□□□□ -0.42
PRKD3-203ENST00000443187 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
PRKD3-203ENST00000443187 IPPQ9Y573 584 aa12.4□□□□□ -0.42
PRKD3-203ENST00000443187 NT5C1B-RDH14C9J2C7 533 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 LINC01565O15544 149 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 HOXA2O43364 376 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 DDHD2O94830 711 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 ERLIN2O94905 339 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 LTBRP36941 435 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 RAB27AP51159 221 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 DLX2Q07687 328 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-203ENST00000443187 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
PRKD3-203ENST00000443187 TIGD5Q53EQ6 642 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 NAALADL2Q58DX5 795 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 RINT1Q6NUQ1 792 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 C1orf186Q6ZWK4 172 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 USP49Q70CQ1 688 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 ZNF280BQ86YH2 543 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 NECAB3Q96P71 396 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-203ENST00000443187 RAB34Q9BZG1 259 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 CSRNP2Q9H175 543 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
PRKD3-203ENST00000443187 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-203ENST00000443187 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 BDP1A6H8Y1 2624 aa12.39□□□□□ -0.43
PRKD3-203ENST00000443187 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
PRKD3-203ENST00000443187 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 SFI1A8K8P3 1242 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 HIP1RO75146 1068 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 LAG3P18627 525 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 NCLP19338 710 aaKnown RBP12.38□□□□□ -0.43
PRKD3-203ENST00000443187 PDCP20941 246 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 BCAR1P56945 870 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
PRKD3-203ENST00000443187 CTC1Q2NKJ3 1217 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 NOMO2Q5JPE7 1267 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 SPECC1Q5M775 1068 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 EEF1DP3Q658K8 133 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 CABP7Q86V35 215 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 THNSL1Q8IYQ7 743 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 CXCL16Q9H2A7 254 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 COG5Q9UP83 839 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 DNM3Q9UQ16 869 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 PCDHB12Q9Y5F1 795 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
PRKD3-203ENST00000443187 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 FSCN2O14926 492 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 STX6O43752 255 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 NPTXRO95502 500 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 SKIP12755 728 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 KCNA5P22460 613 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 MARCKSP29966 332 aaPredicted RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 AXLP30530 894 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 NAMPTP43490 491 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 SLC11A1P49279 550 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 CEBPZQ03701 1054 aaKnown RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 PCBP1Q15365 356 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 ARSHQ5FYA8 562 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 NOTUMQ6P988 496 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 GSTCDQ8NEC7 633 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 CLIC6Q96NY7 704 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 APOL6Q9BWW8 343 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 RSAD1Q9HA92 442 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 FBXO2Q9UK22 296 aaPredicted RBP12.37□□□□□ -0.43
PRKD3-203ENST00000443187 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
PRKD3-203ENST00000443187 HIDE1A8MVS5 230 aa12.36□□□□□ -0.43
PRKD3-203ENST00000443187 F8W810 466 aa12.36□□□□□ -0.43
PRKD3-203ENST00000443187 INPPL1O15357 1258 aa12.36□□□□□ -0.43
PRKD3-203ENST00000443187 ZC3H11AO75152 810 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRKD3-203ENST00000443187 TBX10O75333 385 aa12.36□□□□□ -0.43
PRKD3-203ENST00000443187 GLP2RO95838 553 aa12.36□□□□□ -0.43
PRKD3-203ENST00000443187 POMCP01189 267 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms