RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LEO1Q8WVC0 666 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 CLP1Q92989 425 aaKnown RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 FAM161BQ96MY7 647 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 TMEM117Q9H0C3 514 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 CIZ1Q9ULV3 898 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 CNTNAP2Q9UHC6 1331 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 CCDC169A6NNP5 214 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 K7ERI5 159 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 PRKCBP05771 671 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 GIT2Q14161 759 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 UBXN11Q5T124 520 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 RESP18Q5W5W9 173 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 ADALQ6DHV7 355 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 REEP2Q9BRK0 252 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 FAM13BQ9NYF5 915 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 TDRD15B5MCY1 1934 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-210ENST00000442216 A0A087X0B3 334 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 C5orf67F2Z3F1 127 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 N4BP3O15049 544 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 KRT18P05783 430 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 RB1P06400 928 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 ABCD1P33897 745 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 PRPF4BQ13523 1007 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 E2F4Q16254 413 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 SLC27A1Q6PCB7 646 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 ABI1Q8IZP0 508 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 CPB2Q96IY4 423 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 GAS2L1Q99501 681 aaPredicted RBP16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 PARVGQ9HBI0 331 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 UBN1Q9NPG3 1134 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 RNF19AQ9NV58 838 aa16.57■□□□□ 0.24
CSNK1E-210ENST00000442216 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 SFI1A8K8P3 1242 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 B4GALT5O43286 388 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 FAM13AO94988 1023 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 NCKAP1LP55160 1127 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 HACE1Q8IYU2 909 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 PDILTQ8N807 584 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 SLC17A8Q8NDX2 589 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 ARNTL2Q8WYA1 636 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 CASD1Q96PB1 797 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 KIFC3Q9BVG8 833 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 PLVAPQ9BX97 442 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 PRDM12Q9H4Q4 367 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 STXBP5LQ9Y2K9 1186 aa16.56■□□□□ 0.24
CSNK1E-210ENST00000442216 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 SLC34A2O95436 690 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 FGFR1P11362 822 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 IBSPP21815 317 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 CMA1P23946 247 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 BMPR1AP36894 532 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 AMPD3Q01432 767 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 EPC2Q52LR7 807 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 CLLU1OSQ5K130 101 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 APBB1IPQ7Z5R6 666 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 LRRC43Q8N309 656 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 SMG8Q8ND04 991 aaKnown RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 FBXO22Q8NEZ5 403 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 DDX12PQ92771 950 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 P2RX5Q93086 422 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 ADPGKQ9BRR6 497 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 C17orf80Q9BSJ5 609 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 LMCD1Q9NZU5 365 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 IPPQ9Y573 584 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 TRIP11Q15643 1979 aa16.55■□□□□ 0.24
CSNK1E-210ENST00000442216 CITO14578 2027 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 CARNS1A5YM72 827 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 MYMKA6NI61 221 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 SLC16A4O15374 487 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 TRAK2O60296 914 aa16.54■□□□□ 0.24
CSNK1E-210ENST00000442216 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms