RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HAUS3Q68CZ6 603 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 RBM23Q86U06 439 aaKnown RBP21■□□□□ 0.95
HMGB3P22-201ENST00000442010 MCPH1Q8NEM0 835 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 MICAL1Q8TDZ2 1067 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 LRWD1Q9UFC0 647 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 PUF60Q9UHX1 559 aaKnown RBP21■□□□□ 0.95
HMGB3P22-201ENST00000442010 NT5C1B-RDH14C9J2C7 533 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 LAD1O00515 517 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 MBTPS2O43462 519 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 B4GALT3O60512 393 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 ARF4P18085 180 aaPredicted RBP20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 AFF1P51825 1210 aaKnown RBP20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 DUSP6Q16828 381 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 CDCA2Q69YH5 1023 aaPredicted RBP20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 PADI6Q6TGC4 694 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 MAEAQ7L5Y9 396 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 TMEM173Q86WV6 379 aaPredicted RBP20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 VN1R2Q8NFZ6 395 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 CCDC51Q96ER9 411 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 CPB2Q96IY4 423 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 TCF25Q9BQ70 676 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 EIF2AQ9BY44 585 aaKnown RBP20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 TLE6Q9H808 572 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 RSAD1Q9HA92 442 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 MYH11P35749 1972 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 CNTNAP2Q9UHC6 1331 aa20.99■□□□□ 0.95
HMGB3P22-201ENST00000442010 HIDE1A8MVS5 230 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 PER2O15055 1255 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 EYA4O95677 639 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 GALTP07902 379 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CYP11B2P19099 503 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CCT6AP40227 531 aaKnown RBP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 PRPHP41219 470 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 ALDH7A1P49419 539 aaKnown RBP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 KRT17Q04695 432 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 COASYQ13057 564 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 SMAD2Q15796 467 aaKnown RBP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 PLPP4Q5VZY2 271 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 NOTUMQ6P988 496 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CNNM3Q8NE01 707 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 BSNDQ8WZ55 320 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 KHSRPQ92945 711 aaKnown RBP eCLIP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 NGRNQ9NPE2 291 aaKnown RBP20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 CD207Q9UJ71 328 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 INPP5FQ9Y2H2 1132 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 IPPQ9Y573 584 aa20.98■□□□□ 0.95
HMGB3P22-201ENST00000442010 TRIP11Q15643 1979 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 INPPL1O15357 1258 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 B4GALT5O43286 388 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 ZC3H11AO75152 810 aaKnown RBP eCLIP20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 DDHD2O94830 711 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 NDUFV1P49821 464 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 RBM10P98175 930 aaKnown RBP20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 SMAD4Q13485 552 aaKnown RBP20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 CLUL1Q15846 466 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 MCTP1Q6DN14 999 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 PPP4R3CPQ6ZMV5 832 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 ZNF280BQ86YH2 543 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 DNAJB4Q9UDY4 337 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 KIAA1024Q9UPX6 916 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 FAM50BQ9Y247 325 aa20.97■□□□□ 0.95
HMGB3P22-201ENST00000442010 A0A1B0GUA9 196 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 ARHGEF35A5YM69 484 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 CARNS1A5YM72 827 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 ZP2Q05996 745 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 FAM187BQ17R55 369 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 TMEM184AQ6ZMB5 413 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 GJD3Q8N144 294 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 SMRP1Q8NCR6 262 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 IGSF21Q96ID5 467 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 MMTAG2Q9BU76 263 aaKnown RBP20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 BHMT2Q9H2M3 363 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 FZD8Q9H461 694 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 ENTPD7Q9NQZ7 604 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 PRKAG3Q9UGI9 489 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 BARX2Q9UMQ3 279 aaPredicted RBP20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 SMC3Q9UQE7 1217 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 STK24Q9Y6E0 443 aa20.96■□□□□ 0.95
HMGB3P22-201ENST00000442010 FSD2A1L4K1 749 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 LRRIQ4A6NIV6 560 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 C19orf67A6NJJ6 358 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 PP2D1A8MPX8 630 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 ITGA4P13612 1032 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 SLC11A1P49279 550 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 CUL4AQ13619 759 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 MRPL43Q8N983 215 aaKnown RBP20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 URGCPQ8TCY9 931 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 SNX29Q8TEQ0 813 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 TMEM169Q96HH4 297 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 PRIMPOLQ96LW4 560 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 BACH2Q9BYV9 841 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 RAB34Q9BZG1 259 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 ZBP1Q9H171 429 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 EPHX3Q9H6B9 360 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms