RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 TBK1Q9UHD2 729 aa10.54□□□□□ -0.72
ATL1-202ENST00000441560 RPL26L1Q9UNX3 145 aaKnown RBP10.54□□□□□ -0.72
ATL1-202ENST00000441560 NWD1Q149M9 1564 aa10.54□□□□□ -0.72
ATL1-202ENST00000441560 PFASO15067 1338 aa10.54□□□□□ -0.72
ATL1-202ENST00000441560 SPATA31A3Q5VYP0 1347 aa10.54□□□□□ -0.72
ATL1-202ENST00000441560 TMEM94Q12767 1356 aa10.54□□□□□ -0.72
ATL1-202ENST00000441560 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 RNASEH1O60930 286 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 ASMTLO95671 621 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 ZBTB48P10074 688 aaPredicted RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 IGBP1P78318 339 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 SCYL3Q8IZE3 742 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 CEP70Q8NHQ1 597 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
ATL1-202ENST00000441560 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 TNFRSF25Q93038 417 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 ERVK-5Q9HDB9 667 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 STX18Q9P2W9 335 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 ARMCX3Q9UH62 379 aaPredicted RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 RASAL2Q9UJF2 1139 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 PITPNM2Q9BZ72 1349 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 FAM170AA1A519 330 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 CCDC160A6NGH7 325 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 SPTLC1O15269 473 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 NOL4O94818 638 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 GSTT2P0CG29 244 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 GSTT2BP0CG30 244 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 HALP42357 657 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 FOXO4P98177 505 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 LMNB2Q03252 620 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 C1orf141Q5JVX7 400 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 MCUR1Q96AQ8 359 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 SNX27Q96L92 541 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 CCDC28BQ9BUN5 200 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 OSBPL10Q9BXB5 764 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 SYNCQ9H7C4 482 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 METTL14Q9HCE5 456 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 SLCO1B3Q9NPD5 702 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 DDX25Q9UHL0 483 aaKnown RBP10.53□□□□□ -0.72
ATL1-202ENST00000441560 SYNPO2Q9UMS6 1093 aa10.53□□□□□ -0.72
ATL1-202ENST00000441560 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.72
ATL1-202ENST00000441560 TMEM110-MUSTN1A8MSY1 372 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 PLEKHA8P1O95397 391 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 PLCG2P16885 1265 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 ADD2P35612 726 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.72
ATL1-202ENST00000441560 GEMIN4P57678 1058 aaKnown RBP10.52□□□□□ -0.72
ATL1-202ENST00000441560 DSG1Q02413 1049 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 NPY5RQ15761 445 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 DTHD1Q6ZMT9 781 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 ARHGEF18Q6ZSZ5 1173 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 TRIM67Q6ZTA4 783 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.72
ATL1-202ENST00000441560 KIAA0895Q8NCT3 520 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 TRIM9Q9C026 710 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 TUT1Q9H6E5 874 aaKnown RBP10.52□□□□□ -0.72
ATL1-202ENST00000441560 CNNM2Q9H8M5 875 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 STK32BQ9NY57 414 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 GRHL1Q9NZI5 618 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 IL1RAPL1Q9NZN1 696 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 N6AMT1Q9Y5N5 214 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 PXDNQ92626 1479 aa10.52□□□□□ -0.72
ATL1-202ENST00000441560 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 HOXA10P31260 410 aaPredicted RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 RHBDL3P58872 404 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 PTK2Q05397 1052 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 DMPKQ09013 629 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 STRN3Q13033 797 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 ZNF211Q13398 564 aaPredicted RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 CYLC2Q14093 348 aaPredicted RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 ASIC2Q16515 512 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 C18orf8Q96DM3 657 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 EDEM3Q9BZQ6 932 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 DDX43Q9NXZ2 648 aaKnown RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 ZNF212Q9UDV6 495 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 PHTF1Q9UMS5 762 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 ZNF532Q9HCE3 1301 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.73
ATL1-202ENST00000441560 ADAMTS13Q76LX8 1427 aa10.52□□□□□ -0.73
ATL1-202ENST00000441560 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
ATL1-202ENST00000441560 RGL2O15211 777 aa10.51□□□□□ -0.73
ATL1-202ENST00000441560 EXOC3O60645 756 aa10.51□□□□□ -0.73
ATL1-202ENST00000441560 PDGFRBP09619 1106 aa10.51□□□□□ -0.73
ATL1-202ENST00000441560 STIP1P31948 543 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms