RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.3
EBF3-203ENST00000440978 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
EBF3-203ENST00000440978 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
EBF3-203ENST00000440978 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
EBF3-203ENST00000440978 CNTNAP2Q9UHC6 1331 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 ACKR2O00590 384 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 SLC16A4O15374 487 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 MGEA5O60502 916 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 PRKCBP05771 671 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 SKIP12755 728 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 IDEP14735 1019 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 HOXA11P31270 313 aaPredicted RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 RAB27AP51159 221 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 STRN3Q13033 797 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 HAUS6Q7Z4H7 955 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
EBF3-203ENST00000440978 FAM178BQ8IXR5 827 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 ST6GALNAC4Q9H4F1 302 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 PANK4Q9NVE7 773 aa13.14□□□□□ -0.31
EBF3-203ENST00000440978 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 C9IYK1 514 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 K7ENM7 598 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 AFMP43652 599 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 SARSP49591 514 aaKnown RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 ASIC1P78348 528 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 FAM189BP81408 668 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 DEFB103AP81534 67 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 ALCAMQ13740 583 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
EBF3-203ENST00000440978 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 NPAS4Q8IUM7 802 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 ELOA2Q8IYF1 753 aaPredicted RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 TOP1MTQ969P6 601 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 HVCN1Q96D96 273 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
EBF3-203ENST00000440978 ELAC1Q9H777 363 aaKnown RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
EBF3-203ENST00000440978 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 N4BP3O15049 544 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 B4GALT5O43286 388 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 NR1I2O75469 434 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 GJB5O95377 273 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 EOMESO95936 686 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 GTF2BQ00403 316 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 CUL4BQ13620 913 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 ZNF720Q7Z2F6 126 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 CRIPAKQ8N1N5 446 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 RSPH1Q8WYR4 309 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 MRPL4Q9BYD3 311 aaKnown RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
EBF3-203ENST00000440978 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
EBF3-203ENST00000440978 ZNF623O75123 536 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 GABBR2O75899 941 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 LIG1P18858 919 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 NMT1P30419 496 aaKnown RBP13.11□□□□□ -0.31
EBF3-203ENST00000440978 DPYDQ12882 1025 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 COASYQ13057 564 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 PSMD2Q13200 908 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 POSTNQ15063 836 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 RAB30Q15771 203 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 ZPBP2Q6X784 338 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 TAS1R3Q7RTX0 852 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 MAP4K3Q8IVH8 894 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
EBF3-203ENST00000440978 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 RAD9AQ99638 391 aa13.11□□□□□ -0.31
EBF3-203ENST00000440978 ADPGKQ9BRR6 497 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms