RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TMCO3Q6UWJ1 677 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SLC30A10Q6XR72 485 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 TRAPPC11Q7Z392 1133 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PIGOQ8TEQ8 1089 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SMCR8Q8TEV9 937 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 TBC1D5Q92609 795 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ATP6V0A1Q93050 837 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SLC35C1Q96A29 364 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 INPP4AQ96PE3 977 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SPAG5Q96R06 1193 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 C17orf75Q9HAS0 396 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 AIPL1Q9NZN9 384 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 GCNT4Q9P109 453 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 KCNG1Q9UIX4 513 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 EXOC7Q9UPT5 735 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 JRKLQ9Y4A0 524 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 CHD7Q9P2D1 2997 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 TRIM43BA6NCK2 446 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 BTNL10A8MVZ5 291 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 PI4K2BG5E9Z4 385 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 EPHB6O15197 1021 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 P4HA2O15460 535 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 DHX15O43143 795 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 HIP1RO75146 1068 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CCDC172P0C7W6 258 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 PLS3P13797 630 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 EIF2AK2P19525 551 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ITGB8P26012 769 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 HOXD13P35453 343 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 EIF4A3P38919 411 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 PRKCIP41743 596 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 RARRES1P49788 294 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 POLR2FP61218 127 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 MRPS9P82933 396 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 KCNMA1Q12791 1236 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CETN1Q12798 172 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 SPP2Q13103 211 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 MAPK7Q13164 816 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ITGB3BPQ13352 177 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 RAPGEF1Q13905 1077 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 COG2Q14746 738 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 SLC18A3Q16572 532 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 IFI16Q16666 785 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 MUM1L1Q5H9M0 696 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 DCAF17Q5H9S7 520 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 NSMFQ6X4W1 530 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 GADL1Q6ZQY3 521 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 INTS8Q75QN2 995 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ZNF720Q7Z2F6 126 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CHST13Q8NET6 341 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 TRIM43Q96BQ3 446 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ATG4CQ96DT6 458 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 EEF2KMTQ96G04 330 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 NOX5Q96PH1 765 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ACCSQ96QU6 501 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 FIZ1Q96SL8 496 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 STRA6Q9BX79 667 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CD320Q9NPF0 282 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 HOMER2Q9NSB8 354 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 OGFRQ9NZT2 677 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 DDX41Q9UJV9 622 aaKnown RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ZNF214Q9UL59 606 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 SAMM50Q9Y512 469 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 SAR1BQ9Y6B6 198 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-209ENST00000440653 CACNA1GO43497 2377 aa9.96□□□□□ -0.82
HDAC6-209ENST00000440653 C5orf42Q9H799 3197 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 CXCL11O14625 94 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 TGFB1I1O43294 461 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 AKAP3O75969 853 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 NOL4O94818 638 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 KRT13P13646 458 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 PRLRP16471 622 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 FERP16591 822 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 TCP1P17987 556 aaKnown RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 YWHABP31946 246 aaKnown RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 HMGCS2P54868 508 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 NCKAP1LP55160 1127 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 MYL7Q01449 175 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 KLHL30Q0D2K2 578 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 BMS1Q14692 1282 aaKnown RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 ASTE1Q2TB18 679 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-209ENST00000440653 TCERG1LQ5VWI1 586 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 HGSNATQ68CP4 663 aa9.95□□□□□ -0.82
HDAC6-209ENST00000440653 OTUD6AQ7L8S5 288 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms