RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ZNF165P49910 485 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 PAK1Q13153 545 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 STIM1Q13586 685 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 FAM187BQ17R55 369 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 SLC39A4Q6P5W5 647 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 ZBTB8OSQ8IWT0 167 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 DHX40Q8IX18 779 aaKnown RBP8.22□□□□□ -1.09
UBR3-205ENST00000439681 ENOX1Q8TC92 643 aaKnown RBP8.22□□□□□ -1.09
UBR3-205ENST00000439681 ABHD8Q96I13 439 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 TRAF3IP3Q9Y228 551 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 GINS2Q9Y248 185 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 MYH9P35579 1960 aaKnown RBP8.22□□□□□ -1.09
UBR3-205ENST00000439681 WDR81Q562E7 1941 aa8.22□□□□□ -1.09
UBR3-205ENST00000439681 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 PHLPP2Q6ZVD8 1323 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 DCDC2CA8MYV0 355 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 INO80B-WBP1J3KQ70 363 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 B4GALT5O43286 388 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 CAVIN2O95810 425 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 PRKCBP05771 671 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 CTSHP09668 335 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 ADSSP30520 456 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 HOXA11P31270 313 aaPredicted RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 ABCD1P33897 745 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 MBTPS1Q14703 1052 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 GPNMBQ14956 572 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 MAPK6Q16659 721 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 FOXR2Q6PJQ5 311 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 ACO2Q99798 780 aaKnown RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 TARS2Q9BW92 718 aaKnown RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 INO80BQ9C086 356 aaPredicted RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 GBP3Q9H0R5 595 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 HSD3B7Q9H2F3 369 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 AGPAT3Q9NRZ7 376 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 TYW1Q9NV66 732 aaKnown RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 ATP11BQ9Y2G3 1177 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.09
UBR3-205ENST00000439681 STYXL1Q9Y6J8 313 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 FRMPD3Q5JV73 1810 aa8.21□□□□□ -1.09
UBR3-205ENST00000439681 ABLIM1O14639 778 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 TLR3O15455 904 aaKnown RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 TSPAN1O60635 241 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 STRN3Q13033 797 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 SPATA1Q5VX52 437 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 TSHZ1Q6ZSZ6 1077 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 LUZP1Q86V48 1076 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 FAM228AQ86W67 206 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 ZC3H3Q8IXZ2 948 aaKnown RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 SYCP3Q8IZU3 236 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 AOPEPQ8N6M6 819 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 CAGE1Q8TC20 777 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 FAM200AQ8TCP9 573 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 TMEM174Q8WUU8 243 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 ZBTB45Q96K62 511 aaPredicted RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 SCLT1Q96NL6 688 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 NOC4LQ9BVI4 516 aaKnown RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 HAPLN2Q9GZV7 340 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 AGO3Q9H9G7 860 aaKnown RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 PTPRHQ9HD43 1115 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 PRMT7Q9NVM4 692 aaPredicted RBP8.21□□□□□ -1.1
UBR3-205ENST00000439681 DMAC2Q9NW81 257 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 TBX21Q9UL17 535 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 EXOC7Q9UPT5 735 aa8.21□□□□□ -1.1
UBR3-205ENST00000439681 ARID2Q68CP9 1835 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 UMODL1Q5DID0 1318 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 M0QZ92 97 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 IKBKBO14920 756 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 CLIC2O15247 247 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SELPP16109 830 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 PROZP22891 400 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 SNRPFP62306 86 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 LRRC63Q05C16 580 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 BFSP2Q13515 415 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 PRPF4BQ13523 1007 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 LPIN1Q14693 890 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 NFIL3Q16649 462 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 EDRF1Q3B7T1 1238 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 FBXO47Q5MNV8 452 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 ZPBP2Q6X784 338 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 IRF2BP1Q8IU81 584 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 C12orf56Q8IXR9 622 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 RNF214Q8ND24 703 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 PRIMPOLQ96LW4 560 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 CBWD1Q9BRT8 395 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 MRPL4Q9BYD3 311 aaKnown RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 DNAH12Q6ZR08 3092 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 CNTNAP2Q9UHC6 1331 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 A0A1B0GUA9 196 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 BICDL2A1A5D9 508 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 TRIM43BA6NCK2 446 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 CALUO43852 315 aaPredicted RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 NR3C1P04150 777 aa8.2□□□□□ -1.1
UBR3-205ENST00000439681 ARF4P18085 180 aaPredicted RBP8.2□□□□□ -1.1
UBR3-205ENST00000439681 MYL5Q02045 173 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms