RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FGFBP2Q9BYJ0 223 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 KCTD10Q9H3F6 313 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 TYW1Q9NV66 732 aaKnown RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 TBX21Q9UL17 535 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 CNTNAP2Q9UHC6 1331 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
SCLT1-202ENST00000439369 ERLIN2O94905 339 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
SCLT1-202ENST00000439369 CHRNA1P02708 482 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 CLTBP09497 229 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
SCLT1-202ENST00000439369 HOXD13P35453 343 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 MYBPC2Q14324 1141 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 EDRF1Q3B7T1 1238 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 ANO6Q4KMQ2 910 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 ZCWPW2Q504Y3 356 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 LRRC8DQ7L1W4 858 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 TAS1R3Q7RTX0 852 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 OSMRQ99650 979 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 TRIP12Q14669 1992 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-202ENST00000439369 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
SCLT1-202ENST00000439369 IKBKBO14920 756 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 KIAA0355O15063 1070 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
SCLT1-202ENST00000439369 ZNF165P49910 485 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 PRPF4BQ13523 1007 aaKnown RBP13.91□□□□□ -0.18
SCLT1-202ENST00000439369 AMHR2Q16671 573 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 FBXO47Q5MNV8 452 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 SLFN12LQ6IEE8 588 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 APBB1IPQ7Z5R6 666 aaPredicted RBP13.91□□□□□ -0.18
SCLT1-202ENST00000439369 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
SCLT1-202ENST00000439369 NELFBQ8WX92 580 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 HTATIP2Q9BUP3 242 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 DNAJC25Q9H1X3 360 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 HIPK3Q9H422 1215 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 MAPK8IP1Q9UQF2 711 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 STYXL1Q9Y6J8 313 aa13.91□□□□□ -0.18
SCLT1-202ENST00000439369 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 SMTNL1A8MU46 457 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 HNRNPDLO14979 420 aaKnown RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 GPR182O15218 404 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TSPAN1O60635 241 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TOM1L1O75674 476 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 CTSHP09668 335 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 GARTP22102 1010 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 RPL13P26373 211 aaKnown RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 RFC2P35250 354 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 LIG4P49917 911 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 MYL5Q02045 173 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TTI2Q6NXR4 508 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 CATSPER4Q7RTX7 472 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TNS4Q8IZW8 715 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
SCLT1-202ENST00000439369 SEMA6BQ9H3T3 888 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 CHST12Q9NRB3 414 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 AGPAT3Q9NRZ7 376 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 AGPAT5Q9NUQ2 364 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TMEM39AQ9NV64 488 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 TNFSF13BQ9Y275 285 aa13.9□□□□□ -0.18
SCLT1-202ENST00000439369 N4BP3O15049 544 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 RPS6KA5O75582 802 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 PROZP22891 400 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
SCLT1-202ENST00000439369 KCNA1Q09470 495 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 LPIN1Q14693 890 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 KYAT1Q16773 422 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 SPATA1Q5VX52 437 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
SCLT1-202ENST00000439369 TMEM40Q8WWA1 233 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 BICD1Q96G01 975 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-202ENST00000439369 CEP63Q96MT8 703 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 ACO2Q99798 780 aaKnown RBP13.89□□□□□ -0.19
SCLT1-202ENST00000439369 KIAA1586Q9HCI6 787 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms