RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 PPATQ06203 517 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 PLEKHO2Q8TD55 490 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 TMEM174Q8WUU8 243 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 TIPINQ9BVW5 301 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 COG5Q9UP83 839 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 VWA5AO00534 786 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SHOX2O60902 331 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SMTNP53814 917 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 KRT76Q01546 638 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 DMP1Q13316 513 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ZNF746Q6NUN9 644 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 KAT5Q92993 513 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ATG4CQ96DT6 458 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 CAPS2Q9BXY5 557 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ADRB2P07550 413 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ECHS1P30084 290 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 BAATQ14032 418 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 DCAF12L1Q5VU92 463 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ANO5Q75V66 913 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 MAATS1Q7Z4T9 603 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
HDAC8-214ENST00000439122 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 PPM1KQ8N3J5 372 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SAMD3Q8N6K7 520 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■■■■■ 28.1
HDAC8-214ENST00000439122 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 EXOC7Q9UPT5 735 aa13.11□□□□□ -0.31
HDAC8-214ENST00000439122 DDX3YO15523 660 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 TTI1O43156 1089 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ADSSP30520 456 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 NPTX2P47972 431 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 IRAK1P51617 712 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 RHOT2Q8IXI1 618 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 MAPK13O15264 365 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 DAPK3O43293 454 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 CLSTN1O94985 981 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 CNGA1P29973 690 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ZNF211Q13398 564 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 MOV10L1Q9BXT6 1211 aaKnown RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 KMT5AQ9NQR1 393 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-214ENST00000439122 PNMA2Q9UL42 364 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 PCDHA10Q9Y5I2 948 aa13.1□□□□□ -0.31
HDAC8-214ENST00000439122 TMEM110-MUSTN1A8MSY1 372 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 PPFIA4O75335 1185 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 SGPL1O95470 568 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 CCND2P30279 289 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 SOX10P56693 466 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 BACE1P56817 501 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 GNGT1P63211 74 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 SP4Q02446 784 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
HDAC8-214ENST00000439122 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 CARD9Q9H257 536 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 GABBR1Q9UBS5 961 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms