RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 FAM135BQ49AJ0 1406 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 POLA1P09884 1462 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 ROBO1Q9Y6N7 1651 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 DAPK3O43293 454 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 OPA1O60313 960 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 TOX4O94842 621 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 JUNP05412 331 aaKnown RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 PTX3P26022 381 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 RANGAP1P46060 587 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 BCAR1P56945 870 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 EPHA7Q15375 998 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 RPGRQ92834 1020 aaKnown RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 HAPLN2Q9GZV7 340 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 TNPO3Q9Y5L0 923 aaKnown RBP4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 DMRT1Q9Y5R6 373 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 DCAF1Q9Y4B6 1507 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 SIGLEC1Q9BZZ2 1709 aa4.35□□□□□ -1.71
HMGB1P18-201ENST00000438801 RAMP2O60895 175 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 RPS6KA4O75676 772 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 DNAJC8O75937 253 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 HNRNPLP14866 589 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 KRT4P19013 534 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 SLC9A1P19634 815 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 RABGGTBP53611 331 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 NANOS3P60323 173 aaKnown RBP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 SMAD3P84022 425 aaKnown RBP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 ADCY1Q08828 1119 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 ZNF460Q14592 562 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 MYBPC3Q14896 1274 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 PIK3R6Q5UE93 754 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 MFSD5Q6N075 450 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 PCSK4Q6UW60 755 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 Q6ZPA2 131 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 AGAP2Q99490 1192 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 NRDE2Q9H7Z3 1164 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 SPON1Q9HCB6 807 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 GPRC5BQ9NZH0 403 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 B4GALT6Q9UBX8 382 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 SYNPO2Q9UMS6 1093 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 XDHP47989 1333 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 TTBK1Q5TCY1 1321 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 PRDM2Q13029 1718 aa4.34□□□□□ -1.71
HMGB1P18-201ENST00000438801 KLRG2A4D1S0 409 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 FAM20BO75063 409 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 MFAP3LO75121 409 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 PTGS2P35354 604 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 FLT3P36888 993 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 PLA2G5P39877 138 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 KIR2DL3P43628 341 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ADCY2Q08462 1091 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 SF3A1Q15459 793 aaKnown RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 KANSL1Q7Z3B3 1105 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 DNAJC10Q8IXB1 793 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 MB21D1Q8N884 522 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ATXN2LQ8WWM7 1075 aaKnown RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 HAS1Q92839 578 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ARL8AQ96BM9 186 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 FAM122AQ96E09 287 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZNF512Q96ME7 567 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 MNTQ99583 582 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ELF4Q99607 663 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 TTPALQ9BTX7 342 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 PITHD1Q9GZP4 211 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 OSBPL2Q9H1P3 480 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 C14orf93Q9H972 538 aaKnown RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 NCDNQ9UBB6 729 aa4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 CDK11AQ9UQ88 783 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P18-201ENST00000438801 ARHGEF12Q9NZN5 1544 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 PLA2R1Q13018 1463 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 TCOF1Q13428 1488 aaKnown RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 SOGA1O94964 1423 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 GOLGA6L6A8MZA4 724 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 CBX4O00257 560 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 FOXN1O15353 648 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 MAFGO15525 162 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 IPO13O94829 963 aaKnown RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 PRPF6O94906 941 aaKnown RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 JMJD7P0C870 316 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 NPEPPSP55786 919 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 SPIDRQ14159 915 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 RABL3Q5HYI8 236 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 CDCA2Q69YH5 1023 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 LAIR1Q6GTX8 287 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 TIGD7Q6NT04 549 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 ESRP1Q6NXG1 681 aaKnown RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 HTR3DQ70Z44 454 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 UBE2R2Q712K3 238 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 MRGPREQ86SM8 312 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 PHYKPLQ8IUZ5 450 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 RPUSD2Q8IZ73 545 aaKnown RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 CMTM4Q8IZR5 234 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 C7orf31Q8N865 590 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms