RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF768Q9H5H4 540 aaKnown RBP4.89□□□□□ -1.63
HMGB1P31-201ENST00000437242 HDAC5Q9UQL6 1122 aa4.89□□□□□ -1.63
HMGB1P31-201ENST00000437242 SPO11Q9Y5K1 396 aa4.89□□□□□ -1.63
HMGB1P31-201ENST00000437242 CENPVL1A0A0U1RR11 272 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 DNAJC6O75061 913 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 PCDH8O95206 1070 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 ZFP36P26651 326 aaKnown RBP4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 USP14P54578 494 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 WNT3AP56704 352 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 VPS72Q15906 364 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 SYCE2Q6PIF2 218 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 UNQ6494/PRO21346Q6UXR6 183 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 Q6YL49 198 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 ADGRG3Q86Y34 549 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 PIK3C3Q8NEB9 887 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 SUPT20HQ8NEM7 779 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 PMFBP1Q8TBY8 1022 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 MYEOVQ96EZ4 313 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 IL17RAQ96F46 866 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 NDC1Q9BTX1 674 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 ENKD1Q9H0I2 346 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 TRPM5Q9NZQ8 1165 aa4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P31-201ENST00000437242 ST20-MTHFSA0A0A6YYL1 179 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 AHRRA9YTQ3 701 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 LPXNO60711 386 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 JMJD7P0C870 316 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 CD40P25942 277 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 APOBEC3AP31941 199 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 CASRP41180 1078 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 TAP1Q03518 808 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 HNRNPA0Q13151 305 aaKnown RBP4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 CDCA2Q69YH5 1023 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 OLFML1Q6UWY5 402 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 FERMT2Q96AC1 680 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 BBC3Q96PG8 261 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 OXSMQ9NWU1 459 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 PODXL2Q9NZ53 605 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 ZKSCAN5Q9Y2L8 839 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
HMGB1P31-201ENST00000437242 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 RNASET2O00584 256 aaKnown RBP4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 CFBP00751 764 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 ZEB1P37275 1124 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 C21orf58P58505 322 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 DUSP2Q05923 314 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 MRPL49Q13405 166 aaKnown RBP4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 CFAP100Q494V2 611 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 CREB3L3Q68CJ9 461 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 DOK3Q7L591 496 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 GDF7Q7Z4P5 450 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 LCORLQ8N3X6 602 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 CDYL2Q8N8U2 506 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 PPP1R14CQ8TAE6 165 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 DCLRE1CQ96SD1 692 aaKnown RBP4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 SERHL2Q9H4I8 314 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 ADARB2Q9NS39 739 aaKnown RBP4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 ANKFY1Q9P2R3 1169 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 CLCA2Q9UQC9 943 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 MYPNQ86TC9 1320 aa4.86□□□□□ -1.63
HMGB1P31-201ENST00000437242 PRR5-ARHGAP8B1AHC4 643 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 KIAA0355O15063 1070 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 NCR1O76036 304 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 LY86O95711 162 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 CD38P28907 300 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 AVPR1BP47901 424 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 GZMKP49863 264 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 FAM189BP81408 668 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 CD69Q07108 199 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 CSRP2Q16527 193 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 WDR11Q9BZH6 1224 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 INTS7Q9NVH2 962 aaKnown RBP4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P31-201ENST00000437242 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 NRP2O60462 931 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 GAS7O60861 476 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 HSP90B1P14625 803 aaKnown RBP4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 XPAP23025 273 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 ZKSCAN2Q63HK3 967 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 PLXDC1Q8IUK5 500 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 PASD1Q8IV76 773 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 ARHGEF19Q8IW93 802 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 H2AFY2Q9P0M6 372 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 USP18Q9UMW8 372 aa4.84□□□□□ -1.63
HMGB1P31-201ENST00000437242 TMEM200CA6NKL6 621 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 ELL2O00472 640 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 SEC24DO94855 1032 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 NDUFA10O95299 355 aa4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 ATP2A2P16615 1042 aaKnown RBP4.83□□□□□ -1.64
HMGB1P31-201ENST00000437242 SDSP20132 328 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms