RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 SNX1Q13596 522 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 ANKEF1Q9NU02 776 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 KRT31Q15323 416 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PPP6R3Q5H9R7 873 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 SRRM1Q8IYB3 904 aaKnown RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 INHBEP58166 350 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PHF20Q9BVI0 1012 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 FSD1LQ9BXM9 530 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 VCXQ9H320 206 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 SMYD2Q9NRG4 433 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 KLHL8Q9P2G9 620 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 ARHGAP23Q9P227 1491 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PAPOLAP51003 745 aaKnown RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 MAP1SQ66K74 1059 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 FAM117BQ6P1L5 589 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 SEPT8Q92599 483 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 H3BRJ5 948 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PDHXO00330 501 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 ATP11AP98196 1134 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 EXOSC10Q01780 885 aaKnown RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 ZNF746Q6NUN9 644 aaPredicted RBP16.69■□□□□ 0.26
NEDD4-202ENST00000435532 CHMP6Q96FZ7 201 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PLEKHA4Q9H4M7 779 aa16.69■□□□□ 0.26
NEDD4-202ENST00000435532 PDXKO00764 312 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 THPOP40225 353 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
NEDD4-202ENST00000435532 GPC5P78333 572 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 APBA1Q02410 837 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 KLC3Q6P597 504 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 IP6K2Q9UHH9 426 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 AGAP1Q9UPQ3 857 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 H7C4K7 107 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 MSH2P43246 934 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
NEDD4-202ENST00000435532 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 N4BP2L2Q92802 583 aaPredicted RBP16.68■□□□□ 0.26
NEDD4-202ENST00000435532 PANX2Q96RD6 677 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 STARD7Q9NQZ5 370 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 CLGNO14967 610 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
NEDD4-202ENST00000435532 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
NEDD4-202ENST00000435532 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 GPC4O75487 556 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 PCSK1P29120 753 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 OR1G1P47890 313 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 SDE2Q6IQ49 451 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 HVCN1Q96D96 273 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 VPS39Q96JC1 886 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 RGL1Q9NZL6 768 aa16.68■□□□□ 0.26
NEDD4-202ENST00000435532 RBBP5Q15291 538 aaKnown RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 MIF4GDA9UHW6 222 aaKnown RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 GOLGA8KD6RF30 607 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 ITPRIPL1Q6GPH6 555 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 MGARPQ8TDB4 240 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 ANAPC7Q9UJX3 599 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 TTI1O43156 1089 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 ZFXP17010 805 aaPredicted RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 YY1P25490 414 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 VSTM4Q8IW00 320 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 DDX56Q9NY93 547 aaKnown RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 SALL1Q9NSC2 1324 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 A0A087WWV3 80 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 KRT7P08729 469 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 KLRK1P26718 216 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 ALDH1A3P47895 512 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 NDUFAB1O14561 156 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 PNPLA4P41247 253 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 TTC23LQ6PF05 361 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 PASD1Q8IV76 773 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 MICALL1Q8N3F8 863 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 ASIC4Q96FT7 647 aa16.67■□□□□ 0.26
NEDD4-202ENST00000435532 EPB41L4AQ9HCS5 686 aaPredicted RBP16.67■□□□□ 0.26
NEDD4-202ENST00000435532 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 CREB3O43889 395 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
NEDD4-202ENST00000435532 STX1BP61266 288 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 SATB1Q01826 763 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 MAP3K21Q5TCX8 1036 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 DEPDC1BQ8WUY9 529 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
NEDD4-202ENST00000435532 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms