RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 TRIM7Q9C029 511 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 PIDD1Q9HB75 910 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 GGA2Q9UJY4 613 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 CHRNB2P17787 502 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 PSMD2Q13200 908 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SLFN11Q7Z7L1 901 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SRRM1Q8IYB3 904 aaKnown RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SLCO1B3Q9NPD5 702 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 RIPK2O43353 540 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 PDIA5Q14554 519 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 C12orf65Q9H3J6 166 aaKnown RBP11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 EML1O00423 815 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 FTLP02792 175 aaPredicted RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 COMTP21964 271 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 PTGIRP43119 386 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 SCNN1DP51172 638 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 C1orf131Q8NDD1 294 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 SLC30A5Q8TAD4 765 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 C9orf72Q96LT7 481 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 CDC42EP4Q9H3Q1 356 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ETNK1Q9HBU6 452 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 AFF2P51816 1311 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 CLDN3O15551 220 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 BAG3O95817 575 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 POLE2P56282 527 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ANKRD20A3Q5VUR7 823 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 HEMGNQ9BXL5 484 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 RIOX1Q9H6W3 641 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 HAO1Q9UJM8 370 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ABCB11O95342 1321 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 CCDC169A6NNP5 214 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 VCAM1P19320 739 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 JAM2P57087 298 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 INHBEP58166 350 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 CAPRIN2Q6IMN6 1127 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 VPS36Q86VN1 386 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 MYCT1Q8N699 235 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 HERPUD2Q9BSE4 406 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 GPR88Q9GZN0 384 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 USP15Q9Y4E8 981 aaPredicted RBP11.25□□□□□ -0.61
SCAF4-203ENST00000434667 USH1CQ9Y6N9 552 aa11.25□□□□□ -0.61
SCAF4-203ENST00000434667 ROBO3Q96MS0 1386 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 TOM1O60784 492 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 SPATA31C1P0DKV0 1188 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 MSH2P43246 934 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 CYP4F22Q6NT55 531 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 CCDC50Q8IVM0 306 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 TPH2Q8IWU9 490 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 FAM186BQ8IYM0 893 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 CNOT10Q9H9A5 744 aaKnown RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 FAM86B1E9PN63 330 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 O00370 1275 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 FAM86B2P0C5J1 330 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 GHRP10912 638 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 GM2AP17900 193 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 SOX5P35711 763 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF76P36508 570 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 PPATQ06203 517 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 TAF11Q15544 211 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 RFFLQ8WZ73 363 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 NOP53Q9NZM5 478 aaKnown RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 CBX6O95503 412 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 COPS2P61201 443 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 SATB1Q01826 763 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 TCP10Q12799 353 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 DNAJC3Q13217 504 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms