RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 A0A1B0GUA9 196 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 EPOPA6NHQ4 379 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 HOXA2O43364 376 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 PLS3P13797 630 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 GATMP50440 423 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 ZNF131P52739 623 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 PEX3P56589 373 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 KRT85P78386 507 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 DMP1Q13316 513 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-220ENST00000434407 NOTUMQ6P988 496 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 LEO1Q8WVC0 666 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-220ENST00000434407 KCNN1Q92952 543 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 CHAMP1Q96JM3 812 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 SAMD11Q96NU1 681 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 PRDM12Q9H4Q4 367 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 KCNG1Q9UIX4 513 aa20.28■□□□□ 0.84
HLA-F-220ENST00000434407 CNTNAP2Q9UHC6 1331 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 NPHP3-ACAD11A0A0J9YXS1 232 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 ACKR2O00590 384 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 B4GALT5O43286 388 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 FGFR1P11362 822 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 NCBP1Q09161 790 aaKnown RBP20.27■□□□□ 0.84
HLA-F-220ENST00000434407 RAD51AP2Q09MP3 1159 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 GIT2Q14161 759 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 BTG3Q14201 252 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-220ENST00000434407 E2F4Q16254 413 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 MAPK6Q16659 721 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 CLLU1OSQ5K130 101 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 CPB2Q96IY4 423 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 CASD1Q96PB1 797 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 REEP2Q9BRK0 252 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 KIFC3Q9BVG8 833 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 TMEM117Q9H0C3 514 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 TMEM134Q9H6X4 195 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
HLA-F-220ENST00000434407 PCDHB2Q9Y5E7 798 aa20.27■□□□□ 0.84
HLA-F-220ENST00000434407 REV3LO60673 3130 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 TTLL13PA6NNM8 815 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 SFI1A8K8P3 1242 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 C5orf67F2Z3F1 127 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 EDN1P05305 212 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 PRKCBP05771 671 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 ME1P48163 572 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 DHX8Q14562 1220 aaKnown RBP20.26■□□□□ 0.83
HLA-F-220ENST00000434407 RESP18Q5W5W9 173 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 TAS1R3Q7RTX0 852 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 MYLIPQ8WY64 445 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 ARNTL2Q8WYA1 636 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 RSPH1Q8WYR4 309 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 CERS4Q9HA82 394 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
HLA-F-220ENST00000434407 MRPL42Q9Y6G3 142 aaKnown RBP20.26■□□□□ 0.83
HLA-F-220ENST00000434407 COL4A4P53420 1690 aaPredicted RBP20.26■□□□□ 0.83
HLA-F-220ENST00000434407 CCDC169A6NNP5 214 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 TBKBP1A7MCY6 615 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 LPXNO60711 386 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 POU3F3P20264 500 aaPredicted RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 STAT6P42226 847 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 ADGRE1Q14246 886 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 EPC2Q52LR7 807 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 SV2BQ7L1I2 683 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 TMEM192Q8IY95 271 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 TMEM161BQ8NDZ6 487 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 EIF2AQ9BY44 585 aaKnown RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 SCAND2PQ9GZW5 306 aaPredicted RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 KMT5AQ9NQR1 393 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 LARSQ9P2J5 1176 aaKnown RBP20.25■□□□□ 0.83
HLA-F-220ENST00000434407 RWDD3Q9Y3V2 267 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 PHLPP2Q6ZVD8 1323 aa20.25■□□□□ 0.83
HLA-F-220ENST00000434407 MYMKA6NI61 221 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 K7ERI5 159 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 RB1P06400 928 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 IBSPP21815 317 aaPredicted RBP20.24■□□□□ 0.83
HLA-F-220ENST00000434407 BMPR1AP36894 532 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 PRPF4BQ13523 1007 aaKnown RBP20.24■□□□□ 0.83
HLA-F-220ENST00000434407 PAN2Q504Q3 1202 aaKnown RBP20.24■□□□□ 0.83
HLA-F-220ENST00000434407 NT5DC1Q5TFE4 455 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 SLC27A1Q6PCB7 646 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 AGMOQ6ZNB7 445 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 PDILTQ8N807 584 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 CNNM3Q8NE01 707 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 DNAJC19Q96DA6 116 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 PGBD4Q96DM1 585 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 SPATA32Q96LK8 384 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 CUEDC2Q9H467 287 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
HLA-F-220ENST00000434407 MEIS3P2A8K0S8 358 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 RFXAPO00287 272 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 SLC16A4O15374 487 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 SMTNP53814 917 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 NCKAP1LP55160 1127 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 ADALQ6DHV7 355 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 LRRC55Q6ZSA7 311 aa20.23■□□□□ 0.83
HLA-F-220ENST00000434407 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms